RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IQCMA0A1B0GVH7 501 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 LMO7DNF2Z398 122 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 NGFRP08138 427 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 FGF9P31371 208 aaPredicted RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 RBM34P42696 430 aaKnown RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 NXPH1P58417 271 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 SLC13A2Q13183 592 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 DSG2Q14126 1118 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 AGAP7PQ5VUJ5 663 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 VASNQ6EMK4 673 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 CPOQ8IVL8 374 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 GID4Q8IVV7 300 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 GALNT6Q8NCL4 622 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 RCBTB1Q8NDN9 531 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 FAM83FQ8NEG4 500 aaPredicted RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 GATAD2BQ8WXI9 593 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 SLC38A3Q99624 504 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 NUAK2Q9H093 628 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 SP140LQ9H930 580 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 CMC2Q9NRP2 79 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 CHCHD3Q9NX63 227 aaKnown RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 ERVK13-1Q9NX77 482 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 CRNNQ9UBG3 495 aaPredicted RBP12.88□□□□□ -0.35
HOXC4-202ENST00000430889 KLHL3Q9UH77 587 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 MED31Q9Y3C7 131 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 CCDC182A6NF36 153 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 RCBTB2O95199 551 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 MAOBP27338 520 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 GABRA5P31644 462 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 RORCP51449 518 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 HSD17B7P56937 341 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 STX4Q12846 297 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 ERV3-1Q14264 604 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 ZNHIT3Q15649 155 aaPredicted RBP12.87□□□□□ -0.35
HOXC4-202ENST00000430889 TBC1D25Q3MII6 688 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 SIRT6Q8N6T7 355 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 ARIH2OSQ8N7S6 290 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 C16orf52Q8NHV5 167 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 ASB15Q8WXK1 588 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 UFD1Q92890 307 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 ARSGQ96EG1 525 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 HCAR1Q9BXC0 346 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 TRIM2Q9C040 744 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
HOXC4-202ENST00000430889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.87□□□□□ -0.35
HOXC4-202ENST00000430889 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 LOC110117498-PIK3R3F6TDL0 507 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 H0YIG0 161 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 LRRTM2O43300 516 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 AQP9O43315 295 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 TBX1O43435 398 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 TSPAN19P0C672 248 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SLC2A5P22732 501 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 TNFSF8P32971 234 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 MLLT3P42568 568 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 EPHA4P54764 986 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 STARD6P59095 220 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 TCTE1Q5JU00 501 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 MEPCEQ7L2J0 689 aaKnown RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 CMIPQ8IY22 773 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SLC43A2Q8N370 569 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 FAM181AQ8N9Y4 354 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 OR52L1Q8NGH7 329 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 RBM18Q96H35 190 aaKnown RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PTCHD1Q96NR3 888 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 KCNS3Q9BQ31 491 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 POLE4Q9NR33 117 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ABCB10Q9NRK6 738 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 LANCL2Q9NS86 450 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PLEKHB1Q9UF11 243 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 V9GYH0 126 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 MN1Q10571 1320 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ABCA7Q8IZY2 2146 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PNMA8CA0A1B0GUJ8 204 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 TRDV1A0A1B0GX56 115 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 OR2W5A6NFC9 320 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 FAM183AA6NL82 134 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 BOLA2-SMG1P6H3BVE0 249 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 CLDN4O14493 209 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 CDC123O75794 336 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 IL9P15248 144 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms