RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 KCMF1Q9P0J7 381 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 CACNA1CQ13936 2221 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 ZNF879B4DU55 563 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 FABP3P05413 133 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 PSMA1P25786 263 aaKnown RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 NTSR1P30989 418 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 CD79BP40259 229 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 GBX1Q14549 363 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 GPR155Q7Z3F1 870 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 CCDC116Q8IYX3 515 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 OR5D16Q8NGK9 328 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 DPEP2Q9H4A9 486 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 REEP4Q9H6H4 257 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 COL9A1P20849 921 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 FCARP24071 287 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 PTBP1P26599 531 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHRD-204ENST00000420973 ASMTP46597 345 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 CLDN20P56880 219 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 RAE1P78406 368 aaKnown RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 PUM1Q14671 1186 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHRD-204ENST00000420973 ANKRD39Q53RE8 183 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 ACER2Q5QJU3 275 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 CEACAM20Q6UY09 585 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 RHOUQ7L0Q8 258 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 SPAG16Q8N0X2 631 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 OR9Q1Q8NGQ5 310 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 OR2T4Q8NH00 348 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 NLNQ9BYT8 704 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 REG4Q9BYZ8 158 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 KCNK5O95279 499 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 ALDOBP05062 364 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 PVRP15151 417 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 TBCEQ15813 527 aaPredicted RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 SPIN4Q56A73 249 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 FAM198BQ6UWH4 519 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 PDZD3Q86UT5 571 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 BARHL1Q9BZE3 327 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 MRPS30Q9NP92 439 aaKnown RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 DCAF13Q9NV06 445 aaKnown RBP13.56□□□□□ -0.24
CHRD-204ENST00000420973 PPP1R14DQ9NXH3 145 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 HEATR5BQ9P2D3 2071 aa13.56□□□□□ -0.24
CHRD-204ENST00000420973 UNC13CQ8NB66 2214 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 TCRBV21S2A2A0A5A6 115 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 TMEM200CA6NKL6 621 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 TCAPO15273 167 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 GATBO75879 557 aaKnown RBP13.55□□□□□ -0.24
CHRD-204ENST00000420973 SOX3P41225 446 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 CCR8P51685 355 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 ERV3-1Q14264 604 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 PROX2Q3B8N5 592 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 AVPI1Q5T686 147 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 PDZD9Q8IXQ8 264 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 OR11H7Q8NGC8 314 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 ZDHHC1Q8WTX9 485 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 COL21A1Q96P44 957 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 ADAT1Q9BUB4 502 aaKnown RBP13.55□□□□□ -0.24
CHRD-204ENST00000420973 TMEFF2Q9UIK5 374 aaPredicted RBP13.55□□□□□ -0.24
CHRD-204ENST00000420973 CYP8B1Q9UNU6 501 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
CHRD-204ENST00000420973 PCDHB11Q9Y5F2 797 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 SPAG17Q6Q759 2223 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 AIPO00170 330 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 HCN1O60741 890 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 RORAP35398 523 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 SCARB2Q14108 478 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
CHRD-204ENST00000420973 KIAA1614Q5VZ46 1190 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 SLC38A2Q96QD8 506 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 OR52A5Q9H2C5 316 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 KLHL31Q9H511 634 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 C5orf67F2Z3F1 127 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 VEGFDO43915 354 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 SDC3O75056 442 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 RPN2P04844 631 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 WNT3P56703 355 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 RAB5BP61020 215 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 OR2T5Q6IEZ7 315 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 OR52E1Q8NGJ3 308 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 OR2T29Q8NH02 315 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 THAP6Q8TBB0 222 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 SMPDL3AQ92484 453 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 AHSPQ9NZD4 102 aa13.55□□□□□ -0.24
CHRD-204ENST00000420973 A0A1W2PS29 197 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 H0YIV9 168 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 PLPP1O14494 284 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 SLC28A2O43868 658 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 EML2O95834 649 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 CRYBA1P05813 215 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 GK2Q14410 553 aaPredicted RBP13.54□□□□□ -0.24
CHRD-204ENST00000420973 RGNQ15493 299 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 ATG9BQ674R7 924 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 IKBIPQ70UQ0 350 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 TRIM69Q86WT6 500 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 UNKLQ9H9P5 680 aaKnown RBP13.54□□□□□ -0.24
CHRD-204ENST00000420973 STARD5Q9NSY2 213 aa13.54□□□□□ -0.24
CHRD-204ENST00000420973 ZCCHC3Q9NUD5 404 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms