RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ALDH18A1P54886 795 aaKnown RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 TMEM176BQ3YBM2 270 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 CMC1Q7Z7K0 106 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 GALNT5Q7Z7M9 940 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 SAMD14Q8IZD0 417 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 UBE2J2Q8N2K1 259 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 ZNF786Q8N393 782 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 C1orf52Q8N6N3 182 aaKnown RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 FBXO36Q8NEA4 188 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 OR4C3Q8NH37 302 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 MUS81Q96NY9 551 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 PKP2Q99959 881 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 LMF2Q9BU23 707 aaKnown RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 RAB1BQ9H0U4 201 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 PLK3Q9H4B4 646 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 NMRAL1Q9HBL8 299 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 MED29Q9NX70 200 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 TAS2R16Q9NYV7 291 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 MCM8Q9UJA3 840 aa12.75□□□□□ -0.37
VAMP4-202ENST00000367740 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-202ENST00000367740 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 A0A087WV62 115 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 SYCE1LA8MT33 242 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 B9A039 149 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 UPK1AO00322 258 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 ZNF195O14628 629 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 AVPP01185 164 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 MSMBP08118 114 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 ITGA5P08648 1049 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 IFNGR1P15260 489 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 IVDP26440 423 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 FNTAP49354 379 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 RAC3P60763 192 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 IFT88Q13099 833 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 TRAF3Q13114 568 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 SGO1Q5FBB7 561 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 FAM219BQ5XKK7 198 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 TTC19Q6DKK2 380 aaPredicted RBP12.74□□□□□ -0.37
VAMP4-202ENST00000367740 OR7E24Q6IFN5 339 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 TMEM107Q6UX40 140 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 PIK3R3Q92569 461 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 LRRC37BQ96QE4 947 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 SLC35C2Q9NQQ7 365 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 CA10Q9NS85 328 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 GIMAP4Q9NUV9 329 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 MALT1Q9UDY8 824 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 PCDHB14Q9Y5E9 798 aa12.74□□□□□ -0.37
VAMP4-202ENST00000367740 A0A1W2PNR3 127 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 KIF2AO00139 706 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-202ENST00000367740 KCNH1O95259 989 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 PNPP00491 289 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 NGFRP08138 427 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 GP5P40197 560 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 KHKP50053 298 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 CCNG1P51959 295 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 SLC29A2Q14542 456 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 ZNHIT3Q15649 155 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-202ENST00000367740 CD226Q15762 336 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 EFNB3Q15768 340 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 ADIPOQQ15848 244 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 GLE1Q53GS7 698 aaKnown RBP12.73□□□□□ -0.37
VAMP4-202ENST00000367740 OR2L13Q8N349 312 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 ATP6V1C2Q8NEY4 427 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 B4GALNT2Q8NHY0 566 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 FBXO27Q8NI29 283 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 WDR60Q8WVS4 1066 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 ASB6Q9NWX5 421 aa12.73□□□□□ -0.37
VAMP4-202ENST00000367740 DMGDHQ9UI17 866 aaKnown RBP12.73□□□□□ -0.37
VAMP4-202ENST00000367740 LYNX1G3V0Z9 82 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 PDE5AO76074 875 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 PDYNP01213 254 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 JUNP05412 331 aaKnown RBP12.72□□□□□ -0.37
VAMP4-202ENST00000367740 OR4A8P0C604 315 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 LYNX1P0DP58 116 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 GABRA3P34903 492 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 MPIP34949 423 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 ZNF75DP51815 510 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 TRADDQ15628 312 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 RAPH1Q70E73 1250 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 CENPLQ8N0S6 344 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-202ENST00000367740 ZCCHC24Q8N2G6 241 aaKnown RBP12.72□□□□□ -0.37
VAMP4-202ENST00000367740 CLDND2Q8NHS1 167 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 RHEBL1Q8TAI7 183 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 NEU4Q8WWR8 484 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-202ENST00000367740 ATP6V1E2Q96A05 226 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 APH1AQ96BI3 265 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 CPNE1Q99829 537 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 ELOVL6Q9H5J4 265 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 C3orf14Q9HBI5 128 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 SLC17A5Q9NRA2 495 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 DDX18Q9NVP1 670 aaKnown RBP12.72□□□□□ -0.37
VAMP4-202ENST00000367740 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 AMDHD2Q9Y303 409 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
VAMP4-202ENST00000367740 MYO1GB0I1T2 1018 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms