RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PPP1R3AQ16821 1122 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 DEFB134Q4QY38 66 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 EXO1Q9UQ84 846 aaKnown RBP11.74□□□□□ -0.53
TPR-201ENST00000367478 LTN1O94822 1766 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 RIMS1Q86UR5 1692 aaKnown RBP11.74□□□□□ -0.53
TPR-201ENST00000367478 SURF4O15260 269 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 PFKMP08237 780 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 KCNE1P15382 129 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 SOX3P41225 446 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 DIO3P55073 304 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 CXADRP78310 365 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 OR4Q3Q8NH05 313 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 LPAR4Q99677 370 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 MCOLN1Q9GZU1 580 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 ZCCHC4Q9H5U6 513 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 NOX3Q9HBY0 568 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 SLC2A6Q9UGQ3 507 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 NID2Q14112 1375 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 WASH4PA8MWX3 477 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 GPR39O43194 453 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 CDK5R2Q13319 367 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 TATDN3Q17R31 274 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 SLC22A6Q4U2R8 563 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 OR4K5Q8NGD3 323 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 CHAC2Q8WUX2 184 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 PLEK2Q9NYT0 353 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 NUDT19A8MXV4 375 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 SELENOWP63302 87 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 C6orf89Q6UWU4 347 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 COX15Q7KZN9 410 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 TMEM151BQ8IW70 566 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 GATSQ8NAP1 163 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 C7orf43Q8WVR3 580 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 ANKMY1Q9P2S6 941 aa11.74□□□□□ -0.53
TPR-201ENST00000367478 MT-ND4LP03901 98 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 MGAT3Q09327 533 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 USP51Q70EK9 711 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 PRRC1Q96M27 445 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 NRP1O14786 923 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 ITGAMP11215 1152 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 NFATC4Q14934 902 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 ABHD17BQ5VST6 288 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 GPR155Q7Z3F1 870 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 SERPINA11Q86U17 422 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 SDHDO14521 159 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 CDC123O75794 336 aaPredicted RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 INHAP05111 366 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 ATP1B3P54709 279 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 MRPS34P82930 218 aaKnown RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 SLX4IPQ5VYV7 408 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 PRR18Q8N4B5 295 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 GTF2H4Q92759 462 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 LIN7BQ9HAP6 207 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 ZNF337Q9Y3M9 751 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 TRAPPC2LH3BP13 241 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 TBX18O95935 607 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 ACVRL1P37023 503 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 FUT2Q10981 343 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 TMEM31Q5JXX7 168 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 TMEM71Q6P5X7 295 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 CNTN4Q8IWV2 1026 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 M1APQ8TC57 530 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 IMP4Q96G21 291 aaKnown RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 ARPC5LQ9BPX5 153 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 CEPT1Q9Y6K0 416 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 ELK1P19419 428 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 PSMB3P49720 205 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 CTSL3PQ5NE16 218 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 LCN10Q6JVE6 187 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 CMTM8Q8IZV2 173 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 VPS25Q9BRG1 176 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 NUDT9Q9BW91 350 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 SLIT2O94813 1529 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 DFFBO76075 338 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 INCA1Q0VD86 236 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 PAGE3Q5JUK9 113 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 GLB1L2Q8IW92 636 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 RBMXL3Q8N7X1 1067 aaKnown RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 CDRT4Q8N9R6 151 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 L3HYPDHQ96EM0 354 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 SCN8AQ9UQD0 1980 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 VNN1O95497 513 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 STATHP02808 62 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 RPL17P18621 184 aaKnown RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 LAP3P28838 519 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 HNF1BP35680 557 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 SNCAP37840 140 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 CLDN6P56747 220 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 GRM2Q14416 872 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 WDR5BQ86VZ2 330 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 KLHDC8BQ8IXV7 354 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 SENP5Q96HI0 755 aaPredicted RBP11.73□□□□□ -0.53
TPR-201ENST00000367478 ENKD1Q9H0I2 346 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 KCNK13Q9HB14 408 aa11.73□□□□□ -0.53
TPR-201ENST00000367478 RHBDD3Q9Y3P4 386 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms