RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RLIMQ9NVW2 624 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 FKBP14Q9NWM8 211 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 PAK1IP1Q9NWT1 392 aaPredicted RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 A4GNTQ9UNA3 340 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 RNF6Q9Y252 685 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 IFT52Q9Y366 437 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 MRPS2Q9Y399 296 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 SVEP1Q4LDE5 3571 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 TRBV4-1A0A0J9YWV2 114 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 A0A1W2PS29 197 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 SH3PXD2BA1X283 911 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 SH3D21A4FU49 640 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 TLCD2A6NGC4 264 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 H3BMQ9 156 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 RGS10O43665 173 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 FGF17O60258 216 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 NOL3O60936 208 aaKnown RBP7.57□□□□□ -1.2
CD44-205ENST00000352818 COQ9O75208 318 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 UGT2B17O75795 530 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 CDH3P22223 829 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 ACVR2AP27037 513 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 PCSK6P29122 969 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 SOX18P35713 384 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 MAP3K8P41279 467 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 GABRA4P48169 554 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 CRISP1P54107 249 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 PRKAG1P54619 331 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 UGT2B15P54855 530 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 VSX2P58304 361 aaPredicted RBP7.57□□□□□ -1.2
CD44-205ENST00000352818 CDC42P60953 191 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 PPP1CAP62136 330 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 IGLV3-21P80748 117 aaPredicted RBP7.57□□□□□ -1.2
CD44-205ENST00000352818 COX10Q12887 443 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 GANABQ14697 944 aaKnown RBP7.57□□□□□ -1.2
CD44-205ENST00000352818 NEDD8Q15843 81 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 ARHGAP11BQ3KRB8 267 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 CYP27C1Q4G0S4 372 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 GPAT3Q53EU6 434 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 EIPR1Q53HC9 387 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 KLHL17Q6TDP4 642 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 DEF8Q6ZN54 512 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 FRRS1Q6ZNA5 592 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 MED25Q71SY5 747 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 PRSS41Q7RTY9 318 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 C16orf62Q7Z3J2 963 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 COMTD1Q86VU5 262 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 LACC1Q8IV20 430 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 P3H2Q8IVL5 708 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 CDRT4Q8N9R6 151 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 BPIFB6Q8NFQ5 453 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 TOR1AIP2Q8NFQ8 470 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 OR4D11Q8NGI4 311 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 OR52J3Q8NH60 311 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 FAM81AQ8TBF8 368 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 ADAMTS15Q8TE58 950 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 RAB2BQ8WUD1 216 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 FCGR1BQ92637 280 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 KAT2AQ92830 837 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 C12orf43Q96C57 262 aaKnown RBP7.57□□□□□ -1.2
CD44-205ENST00000352818 CTHRC1Q96CG8 243 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 C16orf58Q96GQ5 468 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 MPP4Q96JB8 637 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 COG8Q96MW5 612 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 UCK2Q9BZX2 261 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 SAP130Q9H0E3 1048 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 PIGUQ9H490 435 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 ANKHQ9HCJ1 492 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 PADI1Q9ULC6 663 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 KCNE3Q9Y6H6 103 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 CCDC88CQ9P219 2028 aa7.57□□□□□ -1.2
CD44-205ENST00000352818 CACNA1CQ13936 2221 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 CNTRLQ7Z7A1 2325 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 HIVEP2P31629 2446 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 HYKKA2RU49 373 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 FITM1A5D6W6 292 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF860A6NHJ4 632 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF99A8MXY4 864 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 M0R3H8 397 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 XPNPEP2O43895 674 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 KIAA0513O60268 411 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 FAM20BO75063 409 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 NSA2O95478 260 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 LY6G6DO95868 133 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 GASTP01350 101 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 EIF2S1P05198 315 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 SLC35E2P0CK97 266 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ACP2P11117 423 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 RNH1P13489 461 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 OSMP13725 252 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 CHMP24386 653 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 FMO3P31513 532 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 GALNSP34059 522 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MEOX1P50221 254 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 TDGF1P3P51864 188 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 SNRPGP62308 76 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 GPLD1P80108 840 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 CHRNEQ04844 493 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MGAT2Q10469 447 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 DUSP8Q13202 625 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms