RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 PLEKHB1Q9UF11 243 aaPredicted RBP16.91■□□□□ 0.3
SHISA3-201ENST00000319234 CLDN4O14493 209 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 FRS3O43559 492 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 SSX4O60224 188 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 SOX30O94993 753 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 THBS1P07996 1170 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 CCNYL3P0C7X3 344 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 GSTT2P0CG29 244 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 GSTT2BP0CG30 244 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 GIMD1P0DJR0 217 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 GLB1P16278 677 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 RPS5P46782 204 aaKnown RBP16.91■□□□□ 0.3
SHISA3-201ENST00000319234 GRM7Q14831 915 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 BAK1Q16611 211 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 CCNJQ5T5M9 372 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 GALNT12Q8IXK2 581 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 SLC35F3Q8IY50 421 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 POGLUT1Q8NBL1 392 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 OR52R1Q8NGF1 315 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 OR8D4Q8NGM9 314 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 ACOT11Q8WXI4 607 aaPredicted RBP16.91■□□□□ 0.3
SHISA3-201ENST00000319234 HOXB13Q92826 284 aaPredicted RBP16.91■□□□□ 0.3
SHISA3-201ENST00000319234 MMABQ96EY8 250 aaPredicted RBP16.91■□□□□ 0.3
SHISA3-201ENST00000319234 ZNF486Q96H40 463 aaPredicted RBP16.91■□□□□ 0.3
SHISA3-201ENST00000319234 ARHGAP9Q9BRR9 750 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 MIXL1Q9H2W2 232 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 TPK1Q9H3S4 243 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 ABCB9Q9NP78 766 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 CTPS2Q9NRF8 586 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 SEMA4GQ9NTN9 838 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 ZNF221Q9UK13 617 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 CARD8Q9Y2G2 431 aa16.91■□□□□ 0.3
SHISA3-201ENST00000319234 THADAQ6YHU6 1953 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 H0YIG0 161 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 TGFBR3LH3BV60 316 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 HRO43593 1189 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 S1PR1P21453 382 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 GPR3P46089 330 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 RFX2P48378 723 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 RGS8P57771 180 aaPredicted RBP16.9■□□□□ 0.3
SHISA3-201ENST00000319234 GPR68Q15743 365 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 FAM131AQ6UXB0 335 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 PLXDC1Q8IUK5 500 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 OR6F1Q8NGZ6 308 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 TM9SF4Q92544 642 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 PMM1Q92871 262 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 C1GALT1C1Q96EU7 318 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 RBM18Q96H35 190 aaKnown RBP16.9■□□□□ 0.3
SHISA3-201ENST00000319234 SCN2AQ99250 2005 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 PRR14Q9BWN1 585 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 SLC22A4Q9H015 551 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 NEK6Q9HC98 313 aa16.9■□□□□ 0.3
SHISA3-201ENST00000319234 TRDV1A0A1B0GX56 115 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 A0A1W2PQL4 384 aaPredicted RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 AP3D1O14617 1153 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 DUX1O43812 170 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 NKX2-2O95096 273 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 OR5F1O95221 314 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 DBIP07108 87 aaKnown RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 LIMS3P0CW19 117 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 LIMS4P0CW20 117 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 RPS4Y1P22090 263 aaKnown RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 GABRA3P34903 492 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 RPS25P62851 125 aaKnown RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 EEF1A1P68104 462 aaKnown RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 POU6F2P78424 691 aaPredicted RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 MXD1Q05195 221 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ACSM1Q08AH1 577 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ZNF155Q12901 538 aaPredicted RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ERV3-1Q14264 604 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 SHBQ15464 509 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 CCDC92Q53HC0 331 aaPredicted RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 EIPR1Q53HC9 387 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ZMAT1Q5H9K5 638 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 OR2G6Q5TZ20 316 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 LYSMD4Q5XG99 296 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ZNF836Q6ZNA1 936 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ZNF485Q8NCK3 441 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 RIT1Q92963 219 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 FAM46AQ96IP4 442 aaKnown RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 ELF4Q99607 663 aaPredicted RBP16.89■□□□□ 0.3
SHISA3-201ENST00000319234 IL20Q9NYY1 176 aa16.89■□□□□ 0.3
SHISA3-201ENST00000319234 A0A1W2PQ09 198 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 FABP12A6NFH5 140 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 CPSF4LA6NMK7 179 aaKnown RBP16.89■□□□□ 0.29
SHISA3-201ENST00000319234 SDC2P34741 201 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 ARRB1P49407 418 aaPredicted RBP16.89■□□□□ 0.29
SHISA3-201ENST00000319234 CDH11P55287 796 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 GPLD1P80108 840 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 HSD11B2P80365 405 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 DSG2Q14126 1118 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 CRTC2Q53ET0 693 aaPredicted RBP16.89■□□□□ 0.29
SHISA3-201ENST00000319234 AADACL4Q5VUY2 407 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 GATAD2BQ8WXI9 593 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 MCHR1Q99705 422 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 KATNB1Q9BVA0 655 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 JAM3Q9BX67 310 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 OR2B2Q9GZK3 357 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 TMEM165Q9HC07 324 aa16.89■□□□□ 0.29
SHISA3-201ENST00000319234 POLE3Q9NRF9 147 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms