RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TXNDC8Q6A555 127 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 TMEM151BQ8IW70 566 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 PAQR8Q8TEZ7 354 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 TOMM40LQ969M1 308 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 WDR6Q9NNW5 1121 aaKnown RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 IL3RAP26951 378 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 SEMG2Q02383 582 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 LSAMPQ13449 338 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 PPP1R3AQ16821 1122 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 NDUFAF5Q5TEU4 345 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 CST9LP1Q5W188 147 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 C15orf54Q8N8G6 183 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 C7orf43Q8WVR3 580 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 FBXL18Q96ME1 805 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ST6GALNAC5Q9BVH7 336 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 RBM24Q9BX46 236 aaKnown RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 A0A1W2PPH5 198 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 FAM227AF5H4B4 570 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 HNF1BP35680 557 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 CPOXP36551 454 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 RPL13AP40429 203 aaKnown RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 VEZF1Q14119 521 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 HIST2H3PS2Q5TEC6 136 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 FGGYQ96C11 551 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 K7EPK0 472 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 S1PR4O95977 384 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 UPP1Q16831 310 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ZNF546Q86UE3 836 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 FAM71E2Q8N5Q1 922 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 DPH7Q9BTV6 452 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 SLCO5A1Q9H2Y9 848 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 PPP1R11O60927 126 aaPredicted RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 PPP3CBP16298 524 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 CATR1Q13166 79 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 GRB7Q14451 532 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ZNF266Q14584 549 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 PAN3Q58A45 887 aaKnown RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 SLX4IPQ5VYV7 408 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 KLHDC8BQ8IXV7 354 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ANKRD19PQ9H560 264 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 GRPRP30550 384 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ETV3P41162 512 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 MEF2AQ02078 507 aaPredicted RBP14.61□□□□□ -0.07
HCFC1-201ENST00000310441 NKPD1Q17RQ9 610 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 HES5Q5TA89 166 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 METTL4Q8N3J2 472 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 LMF1Q96S06 567 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 SLC6A17Q9H1V8 727 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 ISYNA1Q9NPH2 558 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 FZD1Q9UP38 647 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 CEBPZOSA8MTT3 80 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 STATHP02808 62 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 TEAD2Q15562 447 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 OR4K13Q8NH42 304 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 PCDHGA7Q9Y5G6 932 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 HEATR5BQ9P2D3 2071 aa14.61□□□□□ -0.07
HCFC1-201ENST00000310441 FAM186AA6NE01 2351 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 TMEM212A6NML5 194 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 FADS1O60427 444 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 CLIC3O95833 236 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SLC2A1P11166 492 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 EEF1A2Q05639 463 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 FAM160A2Q8N612 972 aaPredicted RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 OR4N2Q8NGD1 307 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 PSMF1Q92530 271 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 LIN28AQ9H9Z2 209 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 OR6C65A6NJZ3 312 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 IGHEP01854 428 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 RAB6AP20340 208 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 UBE2KP61086 200 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SLC22A6Q4U2R8 563 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 IL17RDQ8NFM7 739 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 C8orf33Q9H7E9 229 aaPredicted RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 TXNL4BQ9NX01 149 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 RNF225M0QZC1 329 aaPredicted RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SNTB1Q13884 538 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 C5orf46Q6UWT4 87 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 RADILQ96JH8 1075 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 LHPPQ9H008 270 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SMOXQ9NWM0 555 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 ENTPD2Q9Y5L3 495 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 ATP1B3P54709 279 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 TRA2BP62995 288 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 RBPJQ06330 500 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 CNTN4Q8IWV2 1026 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 OR5B2Q96R09 309 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 PCDHB10Q9UN67 800 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 ECM29Q5VYK3 1845 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SCAMP1O15126 338 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 LARP4Q71RC2 724 aaKnown RBP eCLIP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 CLEC4DQ8WXI8 215 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 MKRN2Q9H000 416 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 EBF1Q9UH73 591 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 TRAPPC2LH3BP13 241 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 HAPLN1P10915 354 aaPredicted RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 MAGEB1P43366 347 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SLC43A2Q8N370 569 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 MSLNLQ96KJ4 702 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 SAP130Q9H0E3 1048 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms