RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TSPEARQ8WU66 669 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 RNF145Q96MT1 663 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 TMEM120AQ9BXJ8 343 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 UCK2Q9BZX2 261 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 SLC38A1Q9H2H9 487 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 ZNF385DQ9H6B1 395 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 SLC52A3Q9NQ40 469 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 FGFR1OP2Q9NVK5 253 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 PAQR5Q9NXK6 330 aaPredicted RBP21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 L3MBTL1Q9Y468 752 aa21.96■■□□□ 1.11
SDF2L1-201ENST00000248958 KDM4EB2RXH2 506 aaPredicted RBP21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 IL18BPO95998 194 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 CAPN3P20807 821 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 ME2P23368 584 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 PSMA4P25789 261 aaKnown RBP21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 OPRM1P35372 400 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 MDH1P40925 334 aaKnown RBP21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 ARFIP2P53365 341 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 GUCY1A3Q02108 690 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 GTDC1Q4AE62 458 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 OLIG3Q7RTU3 272 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 P4HA3Q7Z4N8 544 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 CMIPQ8IY22 773 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 METTL25Q8N6Q8 603 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 NAXEQ8NCW5 288 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 SMPDL3BQ92485 455 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 LRRC46Q96FV0 321 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 KIAA1549Q9HCM3 1950 aa21.95■■□□□ 1.1
SDF2L1-201ENST00000248958 NBPF19A0A087WUL8 3843 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 NKX2-6A6NCS4 301 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 SHISA8B8ZZ34 492 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 SEC14L5O43304 696 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 OIP5O43482 229 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 DNAJA2O60884 412 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 TMIGD3P0DMS9 266 aaPredicted RBP21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 ETFAP13804 333 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 COX6B1P14854 86 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 HOXB9P17482 250 aaPredicted RBP21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 PGM1P36871 562 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 ZNF136P52737 540 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 SUCLG1P53597 346 aaKnown RBP21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 CRISP3P54108 245 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 KCNJ10P78508 379 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 SKP2Q13309 424 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 RGNQ15493 299 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 MAPK14Q16539 360 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 PDSS1Q5T2R2 415 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 OR2A2Q6IF42 318 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 LIX1LQ8IVB5 337 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 C9orf106Q8NAJ2 232 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 POC1BQ8TC44 478 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 AURKBQ96GD4 344 aaPredicted RBP21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 MRGPRX4Q96LA9 322 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 SPOCK3Q9BQ16 436 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 ENKD1Q9H0I2 346 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 LEF1Q9UJU2 399 aaPredicted RBP21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 CORO2BQ9UQ03 480 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 ZNF175Q9Y473 711 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 GMEB1Q9Y692 573 aa21.94■■□□□ 1.1
SDF2L1-201ENST00000248958 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 AGAP5A6NIR3 686 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 C19orf84I3L1E1 186 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 CHRM4P08173 479 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 PGCP20142 388 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 RNF144AP50876 292 aaPredicted RBP21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 CCR4P51679 360 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 CLDN15P56746 228 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 CLDN20P56880 219 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 TFF3Q07654 80 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 FOXF1Q12946 379 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 NDUFAF6Q330K2 333 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 SLC25A53Q5H9E4 307 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 PAGE3Q5JUK9 113 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 ESPNLQ6ZVH7 1005 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 GGNQ86UU5 652 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 HEATR5AQ86XA9 2040 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 PEX5LQ8IYB4 626 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 FAM71CQ8NEG0 241 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 TMEM234Q8WY98 164 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 SFXN3Q9BWM7 321 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 EXOSC3Q9NQT5 275 aaKnown RBP21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 NDUFAF1Q9Y375 327 aa21.93■■□□□ 1.1
SDF2L1-201ENST00000248958 UTP20O75691 2785 aaKnown RBP21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 CENPVL1A0A0U1RR11 272 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 SLC22A20A6NK97 555 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 GJE1A6NN92 205 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 CYP7B1O75881 506 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 CRHP06850 196 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 DBIP07108 87 aaKnown RBP21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 TFPTP0C1Z6 253 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 UBTFL6P0CB48 400 aaPredicted RBP21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 BMP2P12643 396 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 IL7RP16871 459 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 PRKCAP17252 672 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 BMP5P22003 454 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 SLC6A8P48029 635 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 SGCBQ16585 318 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 ACBD4Q8NC06 268 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 FBXO27Q8NI29 283 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 WDR60Q8WVS4 1066 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms