RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ITGA2P17301 1181 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 CCR4P51679 360 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 C17orf67Q0P5P2 114 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 NDUFAF6Q330K2 333 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 SPINK14Q6IE38 97 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 SLC30A6Q6NXT4 461 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 TMEM81Q6P7N7 255 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 MDGA2Q7Z553 956 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 GRAMD2AQ8IUY3 354 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 CNOT9Q92600 299 aaKnown RBP20.7■□□□□ 0.9
ACTN4-210ENST00000588618 CHID1Q9BWS9 393 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 GALNT9Q9HCQ5 603 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 ARMC1Q9NVT9 282 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 WIF1Q9Y5W5 379 aa20.7■□□□□ 0.9
ACTN4-210ENST00000588618 CACNA1GO43497 2377 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 OIP5O43482 229 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 ADAM11O75078 769 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 TIPRLO75663 272 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 SLC25A12O75746 678 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 MAGEA2P43356 314 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 NPTX1Q15818 432 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 NRF1Q16656 503 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 AAGABQ6PD74 315 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF550Q7Z398 422 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 RANBP3LQ86VV4 465 aaPredicted RBP20.69■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF227Q86WZ6 799 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 ZDHHC21Q8IVQ6 265 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF440Q8IYI8 595 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 LILRA2Q8N149 483 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 HAS2Q92819 552 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 SH3YL1Q96HL8 342 aaPredicted RBP20.69■□□□□ 0.9
ACTN4-210ENST00000588618 ARHGDIGQ99819 225 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 AMBRA1Q9C0C7 1298 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 IL1RAPQ9NPH3 570 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 DNAJB12Q9NXW2 375 aaKnown RBP20.69■□□□□ 0.9
ACTN4-210ENST00000588618 PPP4R1LQ9P1A2 415 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 CARD8Q9Y2G2 431 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 FAM32AQ9Y421 112 aaKnown RBP20.69■□□□□ 0.9
ACTN4-210ENST00000588618 BOD1L1Q8NFC6 3051 aa20.69■□□□□ 0.9
ACTN4-210ENST00000588618 hCG_2039718K7EN88 272 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 AP3D1O14617 1153 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 TPST2O60704 377 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 UQCRBP14927 111 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 MASP1P48740 699 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 RCN1Q15293 331 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 DEF8Q6ZN54 512 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 PACS2Q86VP3 889 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 TSPYL5Q86VY4 417 aaPredicted RBP20.68■□□□□ 0.9
ACTN4-210ENST00000588618 OR6T1Q8NGN1 323 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 DUSP19Q8WTR2 217 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 SLC35B4Q969S0 331 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 C5orf34Q96MH7 638 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 SMAD5Q99717 465 aaKnown RBP20.68■□□□□ 0.9
ACTN4-210ENST00000588618 SH2D2AQ9NP31 389 aa20.68■□□□□ 0.9
ACTN4-210ENST00000588618 NKX1-2Q9UD57 310 aaPredicted RBP20.68■□□□□ 0.9
ACTN4-210ENST00000588618 CNOT11Q9UKZ1 510 aaKnown RBP20.68■□□□□ 0.9
ACTN4-210ENST00000588618 PCDHGA9Q9Y5G4 932 aaKnown RBP20.68■□□□□ 0.9
ACTN4-210ENST00000588618 B4DXG7 233 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 NEURL1O76050 574 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 DIRAS1O95057 198 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 GKN3PP0CG01 181 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 PRG2P13727 222 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 CD46P15529 392 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 PTGDSP41222 190 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 CYP4Z1Q86W10 505 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 LSRQ86X29 649 aaPredicted RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 KDF1Q8NAX2 398 aaPredicted RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 SIGLEC12Q96PQ1 595 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 KLHDC3Q9BQ90 382 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 PRR14Q9BWN1 585 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 EXOSC3Q9NQT5 275 aaKnown RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 HRH3Q9Y5N1 445 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 DSPP15924 2871 aaKnown RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 ANKRD33BA6NCL7 494 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 C2orf72A6NCS6 295 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 EIF4E2O60573 245 aaKnown RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 SNX4O95219 450 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 NUDT14O95848 222 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 ITGB2P05107 769 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 FUT4P22083 530 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 IFNA8P32881 189 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 RYKP34925 604 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 GAS1P54826 345 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 HOXC5Q00444 222 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 RIPK1Q13546 671 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 FBXW10Q5XX13 1052 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 HMBOX1Q6NT76 420 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 FAM71CQ8NEG0 241 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 SNRNP27Q8WVK2 155 aaKnown RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 ANGPTL4Q9BY76 406 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 LAT2Q9GZY6 243 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 NDUFAF4Q9P032 175 aa20.67■□□□□ 0.9
ACTN4-210ENST00000588618 TESQ9UGI8 421 aaKnown RBP20.67■□□□□ 0.9
ACTN4-210ENST00000588618 G3V3Y1 287 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 J3KTA2 159 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 HNRNPRO43390 633 aaKnown RBP20.66■□□□□ 0.9
ACTN4-210ENST00000588618 GMFGO60234 142 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 ATP6V1G2O95670 118 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 FCGR1AP12314 374 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF136P52737 540 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms