RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PRSS50Q9UI38 385 aa17.58■□□□□ 0.4
CCDC40-206ENST00000572083 POLR3HQ9Y535 204 aaPredicted RBP17.58■□□□□ 0.4
CCDC40-206ENST00000572083 YLPM1P49750 1951 aaKnown RBP17.57■□□□□ 0.4
CCDC40-206ENST00000572083 IGHV3-15A0A0B4J1V0 119 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 ELOA3DA6NLF2 546 aaPredicted RBP17.57■□□□□ 0.4
CCDC40-206ENST00000572083 PRKD3O94806 890 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 NKX2-2O95096 273 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 YES1P07947 543 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 NGFRP08138 427 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 LINGO3P0C6S8 592 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 MANFP55145 182 aaKnown RBP17.57■□□□□ 0.4
CCDC40-206ENST00000572083 CD226Q15762 336 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 ELOA3BQ3SY89 546 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 C11orf71Q6IPW1 123 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 Q6ZT83 130 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 ZNF551Q7Z340 670 aaPredicted RBP17.57■□□□□ 0.4
CCDC40-206ENST00000572083 SZRD1Q7Z422 152 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 MMGT1Q8N4V1 131 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 ELOA3Q8NG57 546 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 OR2W6PQ8NHA6 318 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC40-206ENST00000572083 MYNNQ9NPC7 610 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 SIRT5Q9NXA8 310 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 TAS2R7Q9NYW3 318 aa17.57■□□□□ 0.4
CCDC40-206ENST00000572083 TTC36A6NLP5 189 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 TRIM49D1C9J1S8 452 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 IGHV4-31P0DP07 118 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 ACP2P11117 423 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 PRPS2P11908 318 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 HPGDP15428 266 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 SLC25A16P16260 332 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 EDNRAP25101 427 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 MAP3K8P41279 467 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 PRKAG1P54619 331 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 DSCR9P59020 149 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 SPOCK1Q08629 439 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 CYB5R2Q6BCY4 276 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 B4GALNT2Q8NHY0 566 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 OTUB1Q96FW1 271 aaPredicted RBP17.56■□□□□ 0.4
CCDC40-206ENST00000572083 USB1Q9BQ65 265 aaKnown RBP17.56■□□□□ 0.4
CCDC40-206ENST00000572083 CXorf36Q9H7Y0 433 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 COQ10BQ9H8M1 238 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 HHATLQ9HCP6 504 aa17.56■□□□□ 0.4
CCDC40-206ENST00000572083 EFNA2O43921 213 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 KCNK2O95069 426 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 PYGBP11216 843 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 SRD5A1P18405 259 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 TAC1P20366 129 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 ENPP1P22413 925 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 IGFBP5P24593 272 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 ELK4P28324 431 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 TTKP33981 857 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 GPC1P35052 558 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 OR3A2P47893 321 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 SERPINB9P50453 376 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 RNF144AP50876 292 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-206ENST00000572083 ZNF117Q03924 483 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 TMEM176BQ3YBM2 270 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-206ENST00000572083 VPS26BQ4G0F5 336 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 MISPQ8IVT2 679 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 ATP6V1C2Q8NEY4 427 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 FAM168AQ92567 244 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 HOXB13Q92826 284 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-206ENST00000572083 MUCL1Q96DR8 90 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 CHODLQ9H9P2 273 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 GP6Q9HCN6 339 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 CBLN4Q9NTU7 201 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 ZDHHC18Q9NUE0 388 aa17.55■□□□□ 0.4
CCDC40-206ENST00000572083 C9JVG2 144 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 E7EQL1 145 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 SCDO00767 359 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 LMX1BO60663 402 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 NUDT14O95848 222 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 ENO1P06733 434 aaKnown RBP17.54■□□□□ 0.4
CCDC40-206ENST00000572083 EIF1P41567 113 aaKnown RBP17.54■□□□□ 0.4
CCDC40-206ENST00000572083 FOXA1P55317 472 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 SLC7A5Q01650 507 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 LCP2Q13094 533 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 RAB35Q15286 201 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 IMPG1Q17R60 797 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 CCNJQ5T5M9 372 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 ANKRD26P1Q6NSI1 321 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 CDRT4Q8N9R6 151 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 SLC16A11Q8NCK7 471 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 FBXO27Q8NI29 283 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 ZFP90Q8TF47 636 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 CIDECQ96AQ7 238 aaPredicted RBP17.54■□□□□ 0.4
CCDC40-206ENST00000572083 ZNF775Q96BV0 537 aaPredicted RBP17.54■□□□□ 0.4
CCDC40-206ENST00000572083 PSD2Q9BQI7 771 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 UBQLN4Q9NRR5 601 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 ING1Q9UK53 422 aaPredicted RBP17.54■□□□□ 0.4
CCDC40-206ENST00000572083 POU2F3Q9UKI9 436 aa17.54■□□□□ 0.4
CCDC40-206ENST00000572083 PLCE1Q9P212 2302 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 POC1B-GALNT4F8VUJ3 575 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 PDPK1O15530 556 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 IFI6P09912 130 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 PKNOX1P55347 436 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 DUSP5Q16690 384 aa17.53■□□□□ 0.4
CCDC40-206ENST00000572083 TIMM23BQ5SRD1 257 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms