RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 ARPC1BO15143 372 aaKnown RBP12.92□□□□□ -0.34
SHMT2-226ENST00000556825 F10P00742 488 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 IFNA17P01571 189 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 ICAM1P05362 532 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
SHMT2-226ENST00000556825 STAT5AP42229 794 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 AP3S2P59780 193 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 DGCR2P98153 550 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 PITPNAQ00169 270 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 GFOD2Q3B7J2 385 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 HBMQ6B0K9 141 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 DOK6Q6PKX4 331 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 TSEN54Q7Z6J9 526 aaKnown RBP12.92□□□□□ -0.34
SHMT2-226ENST00000556825 OR52I1Q8NGK6 324 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 FAM151AQ8WW52 585 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 F2RL3Q96RI0 385 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 MTERF1Q99551 399 aaKnown RBP12.92□□□□□ -0.34
SHMT2-226ENST00000556825 TBL1YQ9BQ87 522 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 MENTQ9BUN1 341 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 SEC61A2Q9H9S3 476 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 JPH1Q9HDC5 661 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-226ENST00000556825 GRHPRQ9UBQ7 328 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 FZD10Q9ULW2 581 aa12.92□□□□□ -0.34
SHMT2-226ENST00000556825 COL4A5P29400 1685 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 F5H5P2 479 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 FGF16O43320 207 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 KERAO60938 352 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 NFATC1O95644 943 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 HLA-DPB1P04440 258 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 ITGA5P08648 1049 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 BCKDHAP12694 445 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 S1PR1P21453 382 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 NDUFS1P28331 727 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 GABRR2P28476 465 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 GDNFP39905 211 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 MTNR1BP49286 362 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 WNT3P56703 355 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 SCGB2B2Q4G0G5 96 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 ELFN2Q5R3F8 820 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 ETFRF1Q6IPR1 90 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 IL27RAQ6UWB1 636 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 PARGQ86W56 976 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 DNAAF1Q8NEP3 725 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 SH3RF2Q8TEC5 729 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 THEM6Q8WUY1 208 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 C22orf15Q8WYQ4 148 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 EGFL8Q99944 293 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 LAT2Q9GZY6 243 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 GAL3ST2Q9H3Q3 398 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 TMEM248Q9NWD8 314 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 GALPQ9UBC7 116 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 PCTPQ9UKL6 214 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
SHMT2-226ENST00000556825 C2orf78A6NCI8 922 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 HCRTR2O43614 444 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 MOSPD3O75425 235 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 EPXP11678 715 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 BMP7P18075 431 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 GALNSP34059 522 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 THBS2P35442 1172 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 MAGEB1P43366 347 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 SLBPQ14493 270 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 GINS1Q14691 196 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 TMEM132DQ14C87 1099 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 RNASE12Q5GAN4 147 aaKnown RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 C18orf63Q68DL7 685 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 DEGS2Q6QHC5 323 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 ANKRD33Q7Z3H0 272 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 OR5R1Q8NH85 324 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 GTPBP3Q969Y2 492 aaKnown RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 OR1F2PQ96R84 312 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 NRIP2Q9BQI9 281 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 WDCPQ9H6R7 721 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 TMEM129A0AVI4 362 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 ZNF705EA8MWA4 302 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 B4E171 279 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 LRRN3E7EW58 273 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 GABRPO00591 440 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 CILPO75339 1184 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 UBL3O95164 117 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 KCNK5O95279 499 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 FARS2O95363 451 aaKnown RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 HSD3B1P14060 373 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 HNF1AP20823 631 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 FDXRP22570 491 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 LUMP51884 338 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 H2BFSP57053 126 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 KCNA10Q16322 511 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 KCNMB1Q16558 191 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 PLEKHN1Q494U1 663 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-226ENST00000556825 IL20RBQ6UXL0 311 aa12.9□□□□□ -0.34
SHMT2-226ENST00000556825 ZNF574Q6ZN55 896 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms