RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TRAF3Q13114 568 aa13.46□□□□□ -0.25
CACNB3-220ENST00000551716 ZNF100Q8IYN0 542 aa13.46□□□□□ -0.25
CACNB3-220ENST00000551716 CENPLQ8N0S6 344 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-220ENST00000551716 LINC01356Q8N9X3 169 aa13.46□□□□□ -0.25
CACNB3-220ENST00000551716 DDX18Q9NVP1 670 aaKnown RBP13.46□□□□□ -0.25
CACNB3-220ENST00000551716 PRSS50Q9UI38 385 aa13.46□□□□□ -0.25
CACNB3-220ENST00000551716 GRID1Q9ULK0 1009 aa13.46□□□□□ -0.25
CACNB3-220ENST00000551716 ATP23Q9Y6H3 246 aa13.46□□□□□ -0.25
CACNB3-220ENST00000551716 CIB4A0PJX0 185 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 SERINC4A6NH21 518 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 ZNF724A8MTY0 619 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 MYO1GB0I1T2 1018 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 FAM157AC9JC47 383 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 EIF3HO15372 352 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNB3-220ENST00000551716 LY6HO94772 140 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 KLHL2O95198 593 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 VENTXO95231 258 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 OTCP00480 354 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 HPGDP15428 266 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 IGHV1-2P23083 117 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 RAC3P60763 192 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 CARTPTQ16568 116 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 VPS26BQ4G0F5 336 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 GLE1Q53GS7 698 aaKnown RBP13.45□□□□□ -0.26
CACNB3-220ENST00000551716 PRR31Q5SQ13 230 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 C1QTNF12Q5T7M4 302 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 ZNF433Q8N7K0 673 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-220ENST00000551716 PTGR2Q8N8N7 351 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-220ENST00000551716 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNB3-220ENST00000551716 POC1BQ8TC44 478 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 SRXN1Q9BYN0 137 aa13.45□□□□□ -0.26
CACNB3-220ENST00000551716 FARSBQ9NSD9 589 aaKnown RBP13.45□□□□□ -0.26
CACNB3-220ENST00000551716 STX16-NPEPL1H3BU86 382 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 KIF2AO00139 706 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-220ENST00000551716 UPK1AO00322 258 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 ZNF195O14628 629 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 STX16O14662 325 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 TP73O15350 636 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 PSMG1O95456 288 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 C2P06681 752 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 LINGO3P0C6S8 592 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 LCN1P31025 176 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 NCBP2P52298 156 aaKnown RBP eCLIP13.44□□□□□ -0.26
CACNB3-220ENST00000551716 CHN2P52757 468 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 PHC1P78364 1004 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 CHRNEQ04844 493 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 SWI5Q1ZZU3 235 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 TMEM176BQ3YBM2 270 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-220ENST00000551716 OR7E24Q6IFN5 339 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 B3GLCTQ6Y288 498 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 DEF8Q6ZN54 512 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 GALNT5Q7Z7M9 940 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 OR4C3Q8NH37 302 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 OR52N5Q8NH56 324 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 B4GALNT2Q8NHY0 566 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 ZNF418Q8TF45 676 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-220ENST00000551716 NPAS1Q99742 590 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 PSD2Q9BQI7 771 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 NTMQ9P121 344 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 DMGDHQ9UI17 866 aaKnown RBP13.44□□□□□ -0.26
CACNB3-220ENST00000551716 PCTPQ9UKL6 214 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 SLC25A15Q9Y619 301 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 PCNX3Q9H6A9 2034 aa13.44□□□□□ -0.26
CACNB3-220ENST00000551716 CCT8L1PA6NM43 557 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 M0R1B8 84 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 PCDH7O60245 1069 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 OXSR1O95747 527 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-220ENST00000551716 JUNP05412 331 aaKnown RBP13.43□□□□□ -0.26
CACNB3-220ENST00000551716 IFI6P09912 130 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 ENPP1P22413 925 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 SNRPD2P62316 118 aaKnown RBP13.43□□□□□ -0.26
CACNB3-220ENST00000551716 RASGEF1BQ0VAM2 473 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 NAB1Q13506 487 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 SPIN4Q56A73 249 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 FBXW9Q5XUX1 488 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 TMEM107Q6UX40 140 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 SEMA6DQ8NFY4 1073 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 GPR151Q8TDV0 419 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 C16orf78Q8WTQ4 265 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 ARL8AQ96BM9 186 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 ELP4Q96EB1 424 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 PHF21BQ96EK2 531 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 CXorf36Q9H7Y0 433 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 UBQLN4Q9NRR5 601 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 TAS2R7Q9NYW3 318 aa13.43□□□□□ -0.26
CACNB3-220ENST00000551716 FBXO9Q9UK97 447 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-220ENST00000551716 GPC6Q9Y625 555 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-220ENST00000551716 TRIM77I1YAP6 450 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SCDO00767 359 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SMIM24O75264 130 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SNUPNO95149 360 aaKnown RBP13.42□□□□□ -0.26
CACNB3-220ENST00000551716 KRT6AP02538 564 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 KRT6BP04259 564 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 RBP1P09455 135 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 DDCP20711 480 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms