RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 NKX2-8O15522 239 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 KLK10O43240 276 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 FADS1O60427 444 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 OR6B1O95007 311 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 CSTAP01040 98 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 PRKAR1AP10644 381 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 UBL4AP11441 157 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ITGA3P26006 1051 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 CLK3P49761 638 aaKnown RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 FBXW4P57775 412 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 NPTX1Q15818 432 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 SNCBQ16143 134 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ACER2Q5QJU3 275 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 FCRLBQ6BAA4 426 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 OR2T5Q6IEZ7 315 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 HMBOX1Q6NT76 420 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF550Q7Z398 422 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF605Q86T29 641 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 RANBP3LQ86VV4 465 aaPredicted RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 CYP4Z1Q86W10 505 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 LACC1Q8IV20 430 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 SIRT6Q8N6T7 355 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 OR4D11Q8NGI4 311 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 OR6T1Q8NGN1 323 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 OR2T29Q8NH02 315 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 VANGL1Q8TAA9 524 aaPredicted RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 PHF10Q8WUB8 498 aaKnown RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 DHRS1Q96LJ7 313 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 PRRC1Q96M27 445 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ARHGAP9Q9BRR9 750 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ZBTB20Q9HC78 741 aaPredicted RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 HPF1Q9NWY4 346 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 PRDM4Q9UKN5 801 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 FAM32AQ9Y421 112 aaKnown RBP11.97□□□□□ -0.49
CPNE3-205ENST00000522240 ARGFXA6NJG6 315 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 TAF4O00268 1085 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 AP3D1O14617 1153 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 ADAM10O14672 748 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 MAN1A2O60476 641 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 EIF4E2O60573 245 aaKnown RBP11.96□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF136P52737 540 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 SESN3P58005 492 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 SKP2Q13309 424 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 SNTA1Q13424 505 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 CD226Q15762 336 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 ABHD17BQ5VST6 288 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 B3GNTL1Q67FW5 361 aaPredicted RBP11.96□□□□□ -0.49
CPNE3-205ENST00000522240 APOOLQ6UXV4 268 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 DEF8Q6ZN54 512 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 RTL4Q6ZR62 310 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 AMIGO2Q86SJ2 522 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 OFCC1Q8IZS5 231 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 GALNT16Q8N428 558 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 TMEM156Q8N614 296 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 TOR1AIP2Q8NFQ8 470 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 OR10G3Q8NGC4 313 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 GRHL3Q8TE85 626 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 CNOT9Q92600 299 aaKnown RBP11.96□□□□□ -0.49
CPNE3-205ENST00000522240 SGCZQ96LD1 299 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 NODALQ96S42 347 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 PIP5K1AQ99755 562 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 SH2D2AQ9NP31 389 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 RLIMQ9NVW2 624 aa11.96□□□□□ -0.49
CPNE3-205ENST00000522240 CHCHD2Q9Y6H1 151 aaPredicted RBP11.96□□□□□ -0.49
CPNE3-205ENST00000522240 LOC400499M0QZD8 3231 aa11.96□□□□□ -0.5
CPNE3-205ENST00000522240 FAAHO00519 579 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 EFSO43281 561 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF264O43296 627 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 FRS3O43559 492 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 NDUFB5O43674 189 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 BCAS1O75363 584 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-205ENST00000522240 OR5F1O95221 314 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 ANGPTL1O95841 491 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 IFNA8P32881 189 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 GCKP35557 465 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 CASRP41180 1078 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 SLC6A8P48029 635 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 HLCSP50747 726 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 SMIM11AP58511 58 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 TRIP10Q15642 601 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 OGFRL1Q5TC84 451 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-205ENST00000522240 RBM45Q8IUH3 476 aaKnown RBP11.95□□□□□ -0.5
CPNE3-205ENST00000522240 APLFQ8IW19 511 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-205ENST00000522240 BEST3Q8N1M1 668 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 SVOPLQ8N434 492 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 PAQR8Q8TEZ7 354 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 EPYCQ99645 322 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 WFDC6Q9BQY6 131 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 OCSTAMPQ9BR26 566 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF559Q9BR84 538 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 OSBPL11Q9BXB4 747 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 ING2Q9H160 280 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 METTL7AQ9H8H3 244 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 REEP1Q9H902 201 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 A4GNTQ9UNA3 340 aa11.95□□□□□ -0.5
CPNE3-205ENST00000522240 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms