RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 GSTA1P08263 222 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 TROVE2P10155 538 aaKnown RBP eCLIP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 U2AF2P26368 475 aaKnown RBP eCLIP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CD1BP29016 333 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 SAA4P35542 130 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 TRIM23P36406 574 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 NOVP48745 357 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 NPY2RP49146 381 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CSRP3P50461 194 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ARHGDIAP52565 204 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ARPC4P59998 168 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 EIF3EP60228 445 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 RUNX3Q13761 415 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CRMP1Q14194 572 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ANGPT1Q15389 498 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CD226Q15762 336 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CHRNA6Q15825 494 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 SNCBQ16143 134 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 SSX2Q16385 188 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CNPY1Q3B7I2 92 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CCDC14Q49A88 953 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 NADK2Q4G0N4 442 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ATAD3CQ5T2N8 411 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 LIN9Q5TKA1 542 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ZCCHC12Q6PEW1 402 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 VITQ6UXI7 678 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 APOOLQ6UXV4 268 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 YRDCQ86U90 279 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 SLC22A18ASQ8N1D0 253 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 PYROXD2Q8N2H3 581 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 NECAB1Q8N987 351 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CCNYQ8ND76 341 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 STEAP2Q8NFT2 490 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 OR10T2Q8NGX3 314 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 RHOXF1Q8NHV9 184 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 PDCD6IPQ8WUM4 868 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CRYGNQ8WXF5 182 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 RASD2Q96D21 266 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 GPA33Q99795 319 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 FAM173AQ9BQD7 235 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 TRIM62Q9BVG3 475 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF416Q9BWM5 594 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 API5Q9BZZ5 524 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ATG10Q9H0Y0 220 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 VCX2Q9H322 139 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 RNF41Q9H4P4 317 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 NRN1Q9NPD7 142 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CHRAC1Q9NRG0 131 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 SDHAF3Q9NRP4 125 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 AGPAT3Q9NRZ7 376 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 NUDT15Q9NV35 164 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 IMPAD1Q9NX62 359 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 STX18Q9P2W9 335 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 COPS7AQ9UBW8 275 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 KCNN3Q9UGI6 736 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 TP53TG3Q9ULZ0 132 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 KLHDC2Q9Y2U9 406 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF175Q9Y473 711 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 KANK1Q14678 1352 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ZMYM6O95789 1325 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TRAV9-2A0A087WT02 112 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 A0A0U1RQS6 177 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 FAM240BA0A1B0GVZ2 78 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MFSD2BA6NFX1 497 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ZSCAN5BA6NJL1 495 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 F8WDY8 70 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 K7ERI5 159 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PDLIM1O00151 329 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 HIP1O00291 1037 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 EI24O14681 340 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TRDMT1O14717 391 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 CFLARO15519 480 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MED7O43513 233 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TYROBPO43914 113 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PDE5AO76074 875 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 THY1P04216 161 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PGK2P07205 417 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 RPSAP08865 295 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 CALCBP10092 127 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PRPS2P11908 318 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TNNI3P19429 210 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 NCF2P19878 526 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ACP1P24666 158 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 CHMLP26374 656 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ANXA13P27216 316 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 SPAM1P38567 509 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 HAAOP46952 286 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 SLC6A8P48029 635 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PSMD7P51665 324 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 HMGCS2P54868 508 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 NLRP11P59045 1033 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 SRP54P61011 504 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TNFRSF17Q02223 184 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 KARSQ15046 597 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PDK3Q15120 406 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MAPRE2Q15555 327 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 LTB4RQ15722 352 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 USF2Q15853 346 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MICAQ29983 383 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms