RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNRF4Q8WWF5 429 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 OR8D1Q8WZ84 308 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 BTBD9Q96Q07 612 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 KRT12Q99456 494 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 SYT15Q9BQS2 421 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 DESI2Q9BSY9 194 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC17A9Q9BYT1 436 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 ELOVL4Q9GZR5 314 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 DPEP2Q9H4A9 486 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 EGLN3Q9H6Z9 239 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 C10orf88Q9H8K7 445 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 DYRK4Q9NR20 520 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 ZDHHC18Q9NUE0 388 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 VPS18Q9P253 973 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 ARMCX3Q9UH62 379 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 IL36AQ9UHA7 158 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 ELF5Q9UKW6 265 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 CDH9Q9ULB4 789 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 RUVBL2Q9Y230 463 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 HBS1LQ9Y450 684 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 ANGPTL3Q9Y5C1 460 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 TENM1Q9UKZ4 2725 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 UNC13CQ8NB66 2214 aa2.99□□□□□ -1.93
TOPBP1-208ENST00000511439 TRAV18A0A075B6X5 111 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 IGHV1OR21-1A0A087WYE8 117 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 A0A0B4J203 849 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 A0A1W2PR80 420 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CCDC69A6NI79 296 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ALOX15BO15296 676 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PIN1P1O15428 100 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CLDN3O15551 220 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ST8SIA3O43173 380 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TGDSO95455 350 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TDP2O95551 362 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TRIM49P0CI25 452 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TRIM49CP0CI26 452 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 RPL35AP18077 110 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CYP2A7P20853 494 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CD70P32970 193 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CA5AP35218 305 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CSKP41240 450 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 KCNJ1P48048 391 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC6A12P48065 614 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ACTG1P63261 375 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 SGCGQ13326 291 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 EFTUD2Q15029 972 aaKnown RBP eCLIP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC1A5Q15758 541 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD20A4Q4UJ75 823 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD20A8PQ5CZ79 823 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD20A2Q5SQ80 823 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 C10orf120Q5SQS8 335 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD20A1Q5TYW2 823 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD20A3Q5VUR7 823 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 CASC4Q6P4E1 433 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 GBP6Q6ZN66 633 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 Q6ZPB1 254 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 Q6ZRP5 223 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 LINC00696Q6ZRV3 163 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 FCRLAQ7L513 359 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TAF8Q7Z7C8 310 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PRUNE1Q86TP1 453 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PRSS35Q8N3Z0 413 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD20A12PQ8NF67 263 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 OR10G6Q8NH81 332 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 LILRB4Q8NHJ6 448 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 GRK7Q8WTQ7 553 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PCED1BQ96HM7 432 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 RBM41Q96IZ5 413 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 POM121L2Q96KW2 1035 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 IP6K3Q96PC2 410 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 RUFY1Q96T51 708 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PKP2Q99959 881 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 UBQLN3Q9H347 655 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PLEKHF2Q9H8W4 249 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 RNF121Q9H920 327 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TUFT1Q9NNX1 390 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 IARS2Q9NSE4 1012 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 COMMD8Q9NX08 183 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 SLCO1C1Q9NYB5 712 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 PPP1R3CQ9UQK1 317 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 FARSAQ9Y285 508 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 EXOGQ9Y2C4 368 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 NYNRINQ9P2P1 1898 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 UBR4Q5T4S7 5183 aa2.98□□□□□ -1.93
TOPBP1-208ENST00000511439 TRBV4-1A0A0J9YWV2 114 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 FAM92AA1XBS5 289 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 A4D1N5 150 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 RBMY1BA6NDE4 496 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 RBMY1EA6NEQ0 496 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 SDR42E2A6NKP2 422 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 CCDC169A6NNP5 214 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 HCRTO43612 131 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 TCF21O43680 179 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 SLITRK3O94933 977 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 NXPH2O95156 264 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 GOSR1O95249 250 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 TSPAN12O95859 305 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 YES1P07947 543 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms