RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 PROK2Q9HC23 129 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 PPP4R1LQ9P1A2 415 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 TNRC6AQ8NDV7 1962 aaKnown RBP17.02■□□□□ 0.31
MCF2L-230ENST00000491028 DHRS12A0PJE2 317 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 DPM1O60762 260 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 UBTFL6P0CB48 400 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-230ENST00000491028 PSMA4P25789 261 aaKnown RBP17.01■□□□□ 0.31
MCF2L-230ENST00000491028 ELAVL4P26378 380 aaKnown RBP17.01■□□□□ 0.31
MCF2L-230ENST00000491028 MSX1P28360 303 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 RNF144AP50876 292 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-230ENST00000491028 P2RX1P51575 399 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 SUMO3P55854 103 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-230ENST00000491028 KCNC4Q03721 635 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF117Q03924 483 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 SKP2Q13309 424 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF766Q5HY98 468 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF550Q7Z398 422 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 VTCN1Q7Z7D3 282 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 PACS2Q86VP3 889 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 FAM86B1Q8N7N1 296 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 CNOT9Q92600 299 aaKnown RBP17.01■□□□□ 0.31
MCF2L-230ENST00000491028 SLC47A1Q96FL8 570 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF597Q96LX8 424 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 RLIMQ9NVW2 624 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 ANAPC2Q9UJX6 822 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 PRDM4Q9UKN5 801 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 SH3GLB1Q9Y371 365 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 V9GYQ6 96 aa17.01■□□□□ 0.31
MCF2L-230ENST00000491028 EML6Q6ZMW3 1958 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 KLRC4-KLRK1H3BQV0 150 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 SNPHO15079 494 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 HCRTR2O43614 444 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 TRIM3O75382 744 aaPredicted RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 PDGFAP04085 211 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 SEMG1P04279 462 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 SLC6A8P48029 635 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 MASP1P48740 699 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 RGS8P57771 180 aaPredicted RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 CHRNB3Q05901 458 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 FAM98BQ52LJ0 330 aaKnown RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 COMTD1Q86VU5 262 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 CARM1Q86X55 608 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 ADGRG5Q8IZF4 528 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 CATSPER1Q8NEC5 780 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 OR2M7Q8NG81 312 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 OR10Q1Q8NGQ4 319 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 B4GALNT2Q8NHY0 566 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 C9orf43Q8TAL5 461 aaPredicted RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 DUSP19Q8WTR2 217 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 DTNBP1Q96EV8 351 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 DUS3LQ96G46 650 aaKnown RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 DEPPQ9NTK1 212 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 TESQ9UGI8 421 aaKnown RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 BOKQ9UMX3 212 aaPredicted RBP17■□□□□ 0.31
MCF2L-230ENST00000491028 TP53TG5Q9Y2B4 290 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 CARD8Q9Y2G2 431 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 CSAG2Q9Y5P2 127 aa17■□□□□ 0.31
MCF2L-230ENST00000491028 G3V3Y1 287 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 M0R3H8 397 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 BCAS1O75363 584 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-230ENST00000491028 CYP7B1O75881 506 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 IFNW1P05000 195 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 UQCRBP14927 111 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 DNASE1L1P49184 302 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 NDUFAF6Q330K2 333 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 CBLN3Q6UW01 205 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 Q6ZS92 163 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 GALNTL5Q7Z4T8 443 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 RANBP3LQ86VV4 465 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-230ENST00000491028 PLCZ1Q86YW0 608 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 TMCO5AQ8N6Q1 288 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 FADS6Q8N9I5 356 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 FAM98AQ8NCA5 519 aaKnown RBP16.99■□□□□ 0.31
MCF2L-230ENST00000491028 OR5W2Q8NH69 310 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 ARSGQ96EG1 525 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 SH3YL1Q96HL8 342 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-230ENST00000491028 SEPHS2Q99611 448 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 HES7Q9BYE0 225 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 KLHL1Q9NR64 748 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 ICAM5Q9UMF0 924 aa16.99■□□□□ 0.31
MCF2L-230ENST00000491028 A0A0G2JMM0 328 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 A0A1W2PPB8 328 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 A0A1W2PRS3 328 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 C2orf72A6NCS6 295 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 ANKUB1A6NFN9 424 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 KIR3DP1A8MWS1 328 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 FAAHO00519 579 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 OIP5O43482 229 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 PEX1O43933 1283 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 FMO6PO60774 539 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 FAM87AP0C7U9 286 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 RAP2AP10114 183 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 TNFRSF1BP20333 461 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 CD97P48960 835 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF136P52737 540 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 GPR85P60893 370 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 EPS8Q12929 822 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 CBFBQ13951 182 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF169Q14929 603 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-230ENST00000491028 COL28A1Q2UY09 1125 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms