RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PRKD3O94806 890 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 NKX2-2O95096 273 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 NGFRP08138 427 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 LINGO3P0C6S8 592 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 PYGBP11216 843 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 PRPS2P11908 318 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 ZNF16P17020 682 aaPredicted RBP12.36□□□□□ -0.43
VARS-227ENST00000489979 MAP3K8P41279 467 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 PRIM2P49643 509 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 FOXF1Q12946 379 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 ELOA3BQ3SY89 546 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 C11orf71Q6IPW1 123 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 ZNF551Q7Z340 670 aaPredicted RBP12.36□□□□□ -0.43
VARS-227ENST00000489979 ZNF525Q8N782 197 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 ELOA3Q8NG57 546 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 B4GALNT2Q8NHY0 566 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 FBXO30Q8TB52 745 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.36□□□□□ -0.43
VARS-227ENST00000489979 HTRA1Q92743 480 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 HOXB13Q92826 284 aaPredicted RBP12.36□□□□□ -0.43
VARS-227ENST00000489979 PAFAH2Q99487 392 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 MANSC1Q9H8J5 431 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 GP6Q9HCN6 339 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 MYNNQ9NPC7 610 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 NPAP1Q9NZP6 1156 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 PRSS50Q9UI38 385 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 POLR3HQ9Y535 204 aaPredicted RBP12.36□□□□□ -0.43
VARS-227ENST00000489979 IGHV3-15A0A0B4J1V0 119 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 TRIM49D1C9J1S8 452 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 UBFD1O14562 309 aaKnown RBP12.35□□□□□ -0.43
VARS-227ENST00000489979 EFNA2O43921 213 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 KCNK2O95069 426 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 ENO1P06733 434 aaKnown RBP12.35□□□□□ -0.43
VARS-227ENST00000489979 IFI6P09912 130 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 IGHV4-31P0DP07 118 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 HPGDP15428 266 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 SLC25A16P16260 332 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 TAC1P20366 129 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 ENPP1P22413 925 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 TTKP33981 857 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 THBS2P35442 1172 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 EIF1P41567 113 aaKnown RBP12.35□□□□□ -0.43
VARS-227ENST00000489979 SERPINB9P50453 376 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 PRKAG1P54619 331 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 HSPB3Q12988 150 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 TMEM176BQ3YBM2 270 aaPredicted RBP12.35□□□□□ -0.43
VARS-227ENST00000489979 VPS26BQ4G0F5 336 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 Q6ZT83 130 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 MISPQ8IVT2 679 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
VARS-227ENST00000489979 OR2W6PQ8NHA6 318 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 FAM110BQ8TC76 370 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 CBLN4Q9NTU7 201 aa12.35□□□□□ -0.43
VARS-227ENST00000489979 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 SERTM1A2A2V5 107 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 GJE1A6NN92 205 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 C9JVG2 144 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 E7EQL1 145 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 SCDO00767 359 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ZNF195O14628 629 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 LMX1BO60663 402 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ACP2P11117 423 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 SRD5A1P18405 259 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 IMPDH1P20839 514 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 EDNRAP25101 427 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ELK4P28324 431 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 GPC1P35052 558 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 OR3A2P47893 321 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 LCP2Q13094 533 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 RAB35Q15286 201 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 CD226Q15762 336 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 TIMM23BQ5SRD1 257 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 Q6ZSR9 355 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 SLC43A2Q8N370 569 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 CDRT4Q8N9R6 151 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 OR6Y1Q8NGX8 325 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 CEP70Q8NHQ1 597 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 FBXO27Q8NI29 283 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 FAM168AQ92567 244 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
VARS-227ENST00000489979 GIMAP5Q96F15 307 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 DHRS9Q9BPW9 319 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 FUT8Q9BYC5 575 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 CXorf36Q9H7Y0 433 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 COQ10BQ9H8M1 238 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 BCO1Q9HAY6 547 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 UBQLN4Q9NRR5 601 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
VARS-227ENST00000489979 ING1Q9UK53 422 aaPredicted RBP12.34□□□□□ -0.43
VARS-227ENST00000489979 WBP11Q9Y2W2 641 aaKnown RBP12.34□□□□□ -0.43
VARS-227ENST00000489979 HEATR1Q9H583 2144 aaKnown RBP12.34□□□□□ -0.43
VARS-227ENST00000489979 CCDC151A5D8V7 595 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 POC1B-GALNT4F8VUJ3 575 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 IGHV1-2P23083 117 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 IGFBP5P24593 272 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms