RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TRIP10Q15642 601 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 PDK4Q16654 411 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 USH1GQ495M9 461 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 CCDC14Q49A88 953 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 CELF3Q5SZQ8 465 aaKnown RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 NCR3LG1Q68D85 454 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 CBLN3Q6UW01 205 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 HACD2Q6Y1H2 254 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 IL34Q6ZMJ4 242 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 LPCAT2Q7L5N7 544 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 ERI1Q8IV48 349 aaKnown RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 ZDHHC21Q8IVQ6 265 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 EFCAB13Q8IY85 973 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 ARFGAP2Q8N6H7 521 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 SLC5A11Q8WWX8 675 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 RLN3Q8WXF3 142 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 C18orf25Q96B23 403 aaPredicted RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 ELSPBP1Q96BH3 223 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 DHTKD1Q96HY7 919 aaPredicted RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 VSTM2LQ96N03 204 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 TTC25Q96NG3 672 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 GSDMCQ9BYG8 508 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 TMEM117Q9H0C3 514 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 Q9H3A6 140 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 LPAR2Q9HBW0 351 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 FAM114A2Q9NRY5 505 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 C1orf123Q9NWV4 160 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 RDH8Q9NYR8 311 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 C6orf203Q9P0P8 240 aaPredicted RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 COX16Q9P0S2 106 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 NEU3Q9UQ49 428 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 DHRS7Q9Y394 339 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 ARID1AO14497 2285 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 SF3B1O75533 1304 aaKnown RBP eCLIP2.35□□□□□ -2.03
RFC4-213ENST00000489028 METP08581 1390 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 ARHGAP23Q9P227 1491 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 C15orf38-AP3S2A0A0A6YYH1 394 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 GSAPA4D1B5 854 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 TRIM64CA6NLI5 447 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 WASHC1A8K0Z3 465 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 NPIPA2E9PIF3 369 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 CLDN5O00501 218 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 OR7A17O14581 309 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 XPO1O14980 1071 aaKnown RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 ALOX15BO15296 676 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 RIPK2O43353 540 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 JAK2O60674 1132 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ZNF254O75437 659 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 SPAG6O75602 509 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 GSTT2P0CG29 244 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 GSTT2BP0CG30 244 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 RPA2P15927 270 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 FUT3P21217 361 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ATP6V1C1P21283 382 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 DRD5P21918 477 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 GLRA2P23416 452 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 UGT1A3P35503 534 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 HTR5AP47898 357 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ACADVLP49748 655 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ACTR1AP61163 376 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 RPS6P62753 249 aaKnown RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 SPIBQ01892 262 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ZP4Q12836 540 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 GPM6BQ13491 265 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 EXOSC2Q13868 293 aaKnown RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 CAMK4Q16566 473 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 KYAT1Q16773 422 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 CEP55Q53EZ4 464 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 BEND6Q5SZJ8 279 aaPredicted RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 SLC39A4Q6P5W5 647 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 CES3Q6UWW8 571 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 TFAP2EQ6VUC0 442 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 NET1Q7Z628 596 aaPredicted RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 PARGQ86W56 976 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 CADM2Q8N3J6 435 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 OR5AU1Q8NGC0 362 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 OR52M1Q8NGK5 317 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 OR2T34Q8NGX1 318 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ARNTL2Q8WYA1 636 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 ELMO2Q96JJ3 720 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 SENP8Q96LD8 212 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 NAP1L5Q96NT1 182 aaPredicted RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 ALG12Q9BV10 488 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 EHD1Q9H4M9 534 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 AGPAT5Q9NUQ2 364 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 DCAF13Q9NV06 445 aaKnown RBP2.34□□□□□ -2.03
RFC4-213ENST00000489028 ELOVL2Q9NXB9 296 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 GHRLQ9UBU3 117 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 B9D1Q9UPM9 204 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 RNF6Q9Y252 685 aa2.34□□□□□ -2.03
RFC4-213ENST00000489028 CARMIL1Q5VZK9 1371 aa2.34□□□□□ -2.04
RFC4-213ENST00000489028 PPIAL4CA0A0B4J2A2 164 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 FBLL1A6NHQ2 334 aaKnown RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 K7EQM0 130 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 WWP2O00308 870 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 IMPA2O14732 288 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 MTX2O75431 263 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 PALMO75781 387 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 KIAA0754O94854 1291 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CHRNA1P02708 482 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms