RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GALNT15Q8N3T1 639 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 NLGN4YQ8NFZ3 816 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 OR11G2Q8NGC1 345 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 OR5L2Q8NGL0 311 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 SLC7A13Q8TCU3 470 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 MAGEE2Q8TD90 523 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ADAMTS17Q8TE56 1095 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 GIPC3Q8TF64 312 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 CT55Q8WUE5 264 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 TTC9Q92623 222 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 GATA6Q92908 595 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 HGDQ93099 445 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 SDCCAG3Q96C92 435 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ALPK1Q96QP1 1244 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 NR1H4Q96RI1 486 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 LMF1Q96S06 567 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 CCNL2Q96S94 520 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 MBOAT4Q96T53 435 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PRSS27Q9BQR3 290 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF426Q9BUY5 554 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ADI1Q9BV57 179 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 DGCR6LQ9BY27 220 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 GABARAPL3Q9BY60 117 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 GRIP2Q9C0E4 1043 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ARMC7Q9H6L4 198 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 POLR1BQ9H9Y6 1135 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 SMURF2Q9HAU4 748 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 RLIMQ9NVW2 624 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PDP1Q9P0J1 537 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 TESQ9UGI8 421 aaKnown RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 SLC35A3Q9Y2D2 325 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PTRH2Q9Y3E5 179 aaKnown RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 OR10H1Q9Y4A9 318 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 TESMINQ9Y4I5 508 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 KNTC1P50748 2209 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 A0A087WUU8 490 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 NPIPA5A0A0B4J1W7 369 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TRBV4-1A0A0J9YWV2 114 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TRIM64A6NGJ6 449 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 NPIPA7E9PJI5 369 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 STMND1H3BQB6 276 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 AGRPO00253 132 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 AP3D1O14617 1153 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 KLF4O43474 513 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 RAD1O60671 282 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF354AO60765 605 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ADAM11O75078 769 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 PPM1BO75688 479 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 CYP7B1O75881 506 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 SEC24DO94855 1032 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TNFSF15O95150 251 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 UTS2O95399 124 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 SNAP29O95721 258 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ADAP00813 363 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 IGF2P01344 180 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 NPIPA8P0DM63 369 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 CYP4B1P13584 511 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ICAM2P13598 275 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 PRG2P13727 222 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TCN2P20062 427 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 MYF6P23409 242 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 F8A1P23610 371 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 HTR2AP28223 471 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 CAPGP40121 348 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 FOLR3P41439 243 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 YAP1P46937 504 aaKnown RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 NR0B1P51843 470 aaKnown RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 RAD23AP54725 363 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 CDH12P55289 794 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 RGS8P57771 180 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 SPIBQ01892 262 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ST3GAL3Q11203 375 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 COX10Q12887 443 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 PPP1R8Q12972 351 aaKnown RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 CHAF1BQ13112 559 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 MED21Q13503 144 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 DNASE1L3Q13609 305 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 EFR3AQ14156 821 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 RTP5Q14D33 572 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TRAM2Q15035 370 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 SEC23BQ15437 767 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ST3GAL2Q16842 350 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 EXOC3L2Q2M3D2 409 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF791Q3KP31 576 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 CCDC157Q569K6 752 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ENTPD8Q5MY95 495 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 DCST1Q5T197 706 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 OTUD3Q5T2D3 398 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 PDZK1Q5T2W1 519 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TTC23Q5W5X9 447 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 HLA-DQA1Q5Y7H0 255 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ANKRD34AQ69YU3 496 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 FAAH2Q6GMR7 532 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 C1orf94Q6P1W5 598 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 UGT2A3Q6UWM9 527 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF550Q7Z398 422 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 NUP54Q7Z3B4 507 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 RNF113BQ8IZP6 322 aaKnown RBP6.07□□□□□ -1.44
ATG4A-207ENST00000474825 TAGAPQ8N103 731 aa6.07□□□□□ -1.44
ATG4A-207ENST00000474825 DHRSXQ8N5I4 330 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms