RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CD53P19397 219 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 IL11P20809 199 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 ELK4P28324 431 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 ETV4P43268 484 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 SLC6A8P48029 635 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 SUMO3P55854 103 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 C21orf58P58505 322 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 EMX2Q04743 252 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 CD226Q15762 336 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 SMU1Q2TAY7 513 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 CTU2Q2VPK5 515 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 DCST2Q5T1A1 773 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 HBMQ6B0K9 141 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 RIMKLAQ8IXN7 391 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 KRTCAP2Q8N6L1 136 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 DUSP26Q9BV47 211 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 CXorf36Q9H7Y0 433 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 TIGARQ9NQ88 270 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 GPATCH2Q9NW75 528 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 NOP53Q9NZM5 478 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 C6orf203Q9P0P8 240 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 A0A1W2PPR1 153 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 GJE1A6NN92 205 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 DEFB108AA8MXU0 73 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 TNFSF11O14788 317 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 CXCL13O43927 109 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 SNUPNO95149 360 aaKnown RBP18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 LINGO3P0C6S8 592 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 PABPC4LP0CB38 370 aaKnown RBP18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 CREB1P16220 341 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 PPP3CBP16298 524 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 ADH6P28332 368 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 CCKARP32238 428 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 KLHL26Q53HC5 615 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 KIRREL3Q8IZU9 778 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 MREGQ8N565 214 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 KLHL15Q96M94 604 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 KLHL4Q9C0H6 718 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 ASIC5Q9NY37 505 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 ACTL7BQ9Y614 415 aa18.24■□□□□ 0.51
PDLIM4-206ENST00000474421 A0A0J9YW62 118 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 DUXAA6NLW8 204 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 GTPBP1O00178 669 aaKnown RBP18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 NUDT14O95848 222 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 G6PDP11413 515 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 FPR1P21462 350 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 P2RX1P51575 399 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 ATP12AP54707 1039 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 CLDN8P56748 225 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 CARD18P57730 90 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 ZNF117Q03924 483 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 EXOC3L2Q2M3D2 409 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 KRT71Q3SY84 523 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 STK32CQ86UX6 486 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 LILRA2Q8N149 483 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 POC1BQ8TC44 478 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 OSTF1Q92882 214 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 PIGTQ969N2 578 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 PIK3IP1Q96FE7 263 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 REXO5Q96IC2 774 aaKnown RBP18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 PIP5K1AQ99755 562 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 TMEM185BQ9H7F4 350 aa18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 SSU72Q9NP77 194 aaKnown RBP18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 GPC6Q9Y625 555 aaPredicted RBP18.23■□□□□ 0.51
PDLIM4-206ENST00000474421 BIRC5O15392 142 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 RGS16O15492 202 aaPredicted RBP18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 AK1P00568 194 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 OPN1LWP04000 364 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 SERPINE1P05121 402 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 MYZAPP0CAP1 466 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 HOXC12P31275 282 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 PGS1Q32NB8 556 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 SHEQ5VZ18 495 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 BEND4Q6ZU67 534 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 ZNF550Q7Z398 422 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 NPAS1Q99742 590 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 DLL4Q9NR61 685 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 ICAM5Q9UMF0 924 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 CLEC4AQ9UMR7 237 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 DTNAQ9Y4J8 743 aa18.22■□□□□ 0.51
PDLIM4-206ENST00000474421 ARID1AO14497 2285 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 SIAH2O43255 324 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 ARHGEF9O43307 516 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 DIAPH2O60879 1101 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 TUBBP07437 444 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 SOAT1P35610 550 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 ABCE1P61221 599 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 HBA1P69905 142 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 FOXF1Q12946 379 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 RNPS1Q15287 305 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 CHI3L2Q15782 390 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 CPNE4Q96A23 557 aaPredicted RBP18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 ARL8AQ96BM9 186 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 ZC3HAV1LQ96H79 300 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 OR7D2Q96RA2 312 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 PCDHGB4Q9UN71 923 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 CARD8Q9Y2G2 431 aa18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.21■□□□□ 0.51
PDLIM4-206ENST00000474421 NIPBLQ6KC79 2804 aaeCLIP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms