RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 EPB41P11171 864 aaKnown RBP2.77□□□□□ -1.97
PTCD3-209ENST00000472044 ADSSP30520 456 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 OTX2P32243 289 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 KIR2DS2P43631 304 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 RPL29P47914 159 aaKnown RBP2.77□□□□□ -1.97
PTCD3-209ENST00000472044 DHPSP49366 369 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-209ENST00000472044 P2RY4P51582 365 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 NUCB2P80303 420 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 OTUD4Q01804 1114 aaKnown RBP2.77□□□□□ -1.97
PTCD3-209ENST00000472044 ST3GAL3Q11203 375 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 RAB40BQ12829 278 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 LAGE3Q14657 143 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 SLC5A12Q1EHB4 618 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 ISXQ2M1V0 245 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 CCDC57Q2TAC2 916 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 SLC25A24Q6NUK1 477 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 APTXQ7Z2E3 356 aaKnown RBP2.77□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF677Q86XU0 584 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 ZDHHC21Q8IVQ6 265 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 LINC01561Q8N1V8 128 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 OR2T33Q8NG76 320 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 OR2T34Q8NGX1 318 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 PSMG2Q969U7 264 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 HAVCR1Q96D42 359 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 OR5B2Q96R09 309 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 SLC6A7Q99884 636 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 TMEM9Q9P0T7 183 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 RIMS3Q9UJD0 308 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 CHD4Q14839 1912 aa2.77□□□□□ -1.97
PTCD3-209ENST00000472044 FRMPD4Q14CM0 1322 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 LOC100131303A0A0U1RQF7 123 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 EPOPA6NHQ4 379 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 PP2D1A8MPX8 630 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NPIPA7E9PJI5 369 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 BCAS1O75363 584 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NEBLO76041 1014 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 PGK1P00558 417 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 F10P00742 488 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 IGHV3-23P01764 117 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NPIPA8P0DM63 369 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 CPN1P15169 458 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 KLK2P20151 261 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 SERPINA2P20848 420 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 ADORA2BP29275 332 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NMT1P30419 496 aaKnown RBP2.76□□□□□ -1.97
PTCD3-209ENST00000472044 CA8P35219 290 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 UGT1A3P35503 534 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NOVP48745 357 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 PLA2G16P53816 162 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 EWSR1Q01844 656 aaKnown RBP eCLIP2.76□□□□□ -1.97
PTCD3-209ENST00000472044 CNTN2Q02246 1040 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 SELPLGQ14242 412 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NADK2Q4G0N4 442 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
PTCD3-209ENST00000472044 FHL5Q5TD97 284 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 ACSM5Q6NUN0 579 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 FAM71F2Q6NXP2 309 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 CXCL17Q6UXB2 119 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 TFAP2EQ6VUC0 442 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 ARMCX2Q7L311 632 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF584Q8IVC4 421 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 C11orf42Q8N5U0 333 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 GMCL1P1Q8NEA9 526 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 OR10A7Q8NGE5 316 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 OR2A12Q8NGT7 310 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 THRSPQ92748 146 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 RAB7BQ96AH8 199 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 OMDQ99983 421 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 Q9H3A6 140 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 MEAF6Q9HAF1 191 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 AIPL1Q9NZN9 384 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 OR1A1Q9P1Q5 309 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 B4GALT7Q9UBV7 327 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 CHRNA9Q9UGM1 479 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF221Q9UK13 617 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 NPIPA1Q9UND3 350 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 OR10H1Q9Y4A9 318 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 OARD1Q9Y530 152 aa2.76□□□□□ -1.97
PTCD3-209ENST00000472044 A8MUI8 341 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 E7ENQ6 273 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 TNFSF11O14788 317 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 MSH4O15457 936 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF254O75437 659 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 LYPLA1O75608 230 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-209ENST00000472044 ADCY5O95622 1261 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 SEMG1P04279 462 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 H2BFMP0C1H6 154 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 IGLL1P15814 213 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 CD80P33681 288 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 RGRP47804 291 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 PPT1P50897 306 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 AP3M2P53677 418 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 PJVKQ0ZLH3 352 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 SNTB2Q13425 540 aaKnown RBP2.75□□□□□ -1.97
PTCD3-209ENST00000472044 SYPL1Q16563 259 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 TPD52L1Q16890 204 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-209ENST00000472044 LRRC36Q1X8D7 754 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 KRT71Q3SY84 523 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 RNF212Q495C1 297 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 USH1GQ495M9 461 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms