RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 RSPO3Q9BXY4 272 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 PROK2Q9HC23 129 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 CCM2LQ9NUG4 571 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 ANKRD10Q9NXR5 420 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 PLA2G3Q9NZ20 509 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 PPP4R1LQ9P1A2 415 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 TESQ9UGI8 421 aaKnown RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 BOKQ9UMX3 212 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 KLRC4-KLRK1H3BQV0 150 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 SNPHO15079 494 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 FKBP6O75344 327 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 SFTPCP11686 197 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 MAGEA2P43356 314 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 P2RX1P51575 399 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 PLAURQ03405 335 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF117Q03924 483 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 GLIPR1L2Q4G1C9 344 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 SPINK14Q6IE38 97 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 AAGABQ6PD74 315 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 VTCN1Q7Z7D3 282 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 CARM1Q86X55 608 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 PLCZ1Q86YW0 608 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 FAM86B1Q8N7N1 296 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 FADS6Q8N9I5 356 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 OR5W2Q8NH69 310 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 B4GALNT2Q8NHY0 566 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 DUSP19Q8WTR2 217 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 CANT1Q8WVQ1 401 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 C7orf34Q96L11 122 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF559Q9BR84 538 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 GALNT9Q9HCQ5 603 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 ARMC1Q9NVT9 282 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 RLIMQ9NVW2 624 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 ICAM5Q9UMF0 924 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 SH3GLB1Q9Y371 365 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 MED13Q9UHV7 2174 aa11.58□□□□□ -0.56
SCLT1-202ENST00000439369 IGF2RP11717 2491 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 A0A087WZY1 265 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ANKUB1A6NFN9 424 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 CLDN24A6NM45 220 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 HCRTR2O43614 444 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 UBTFL6P0CB48 400 aaPredicted RBP11.57□□□□□ -0.56
SCLT1-202ENST00000439369 THRBP10828 461 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 PGCP20142 388 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 MASP1P48740 699 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF136P52737 540 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 EPS8Q12929 822 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 CBFBQ13951 182 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 GANABQ14697 944 aaKnown RBP11.57□□□□□ -0.56
SCLT1-202ENST00000439369 INAQ16352 499 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 HYAL4Q2M3T9 481 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF766Q5HY98 468 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 PRAMEF20Q5VT98 475 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 BICRALQ6AI39 1079 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 TIGD3Q6B0B8 471 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 Q6ZS92 163 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 HMGN2P46Q86SG4 172 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 COMTD1Q86VU5 262 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 CYP4Z1Q86W10 505 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 FAM98AQ8NCA5 519 aaKnown RBP11.57□□□□□ -0.56
SCLT1-202ENST00000439369 OR2M7Q8NG81 312 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 OR1J4Q8NGS1 313 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 C9orf43Q8TAL5 461 aaPredicted RBP11.57□□□□□ -0.56
SCLT1-202ENST00000439369 STMN2Q93045 179 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ABHD17AQ96GS6 310 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF347Q96SE7 839 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ARHGAP9Q9BRR9 750 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 RTN4RQ9BZR6 473 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 PTGES2Q9H7Z7 377 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ZFP64Q9NPA5 681 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 CARD8Q9Y2G2 431 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 MRPS18CQ9Y3D5 142 aaKnown RBP11.57□□□□□ -0.56
SCLT1-202ENST00000439369 AP4S1Q9Y587 144 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 ENPP4Q9Y6X5 453 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 FREM2Q5SZK8 3169 aa11.57□□□□□ -0.56
SCLT1-202ENST00000439369 C7orf72A4D263 438 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 FAM47E-STBD1D6RA91 191 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 H0YHG0 523 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 AP3D1O14617 1153 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 HNRNPRO43390 633 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 PEX1O43933 1283 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 CBR3O75828 277 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 FABP3P05413 133 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 LINGO3P0C6S8 592 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 FCGR1AP12314 374 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 RHCEP18577 417 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 IFNA8P32881 189 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ACAA2P42765 397 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 DLX5P56178 289 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ELF3P78545 371 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 FOXO1Q12778 655 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 GK3PQ14409 553 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF169Q14929 603 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 COL28A1Q2UY09 1125 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 LINC00303Q3SY05 128 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms