RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 E7EQL1 145 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 EFNA2O43921 213 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 LY6HO94772 140 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 PRKD3O94806 890 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 YES1P07947 543 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 PYGBP11216 843 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 SLC25A16P16260 332 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 ENPP1P22413 925 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 EDNRAP25101 427 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 TTKP33981 857 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 PRIM2P49643 509 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 MANFP55145 182 aaKnown RBP13.1□□□□□ -0.31
HDAC8-213ENST00000436675 CAV1Q03135 178 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 SPOCK1Q08629 439 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 HSPB3Q12988 150 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 SLC29A2Q14542 456 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 TMEM176BQ3YBM2 270 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-213ENST00000436675 C11orf71Q6IPW1 123 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 SZRD1Q7Z422 152 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 MMGT1Q8N4V1 131 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 CPNE4Q96A23 557 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-213ENST00000436675 MUCL1Q96DR8 90 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 OTUB1Q96FW1 271 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-213ENST00000436675 CBLN4Q9NTU7 201 aa13.1□□□□□ -0.31
HDAC8-213ENST00000436675 SLITRK5O94991 958 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 HPGDP15428 266 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 MAGEA12P43365 314 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 LSM11P83369 360 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDAC8-213ENST00000436675 RUNX1T1Q06455 604 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 ZNF763Q0D2J5 394 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 FAM120AOSQ5T036 256 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 FAM71E1Q6IPT2 247 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 SLC22A25Q6T423 547 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 Q6ZSR9 355 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 FBXL14Q8N1E6 418 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 FBXO27Q8NI29 283 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 ACTRT2Q8TDY3 377 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 ZNF382Q96SR6 550 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 CXorf36Q9H7Y0 433 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 GRID1Q9ULK0 1009 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 KCNS2Q9ULS6 477 aa13.09□□□□□ -0.31
HDAC8-213ENST00000436675 POLR3HQ9Y535 204 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-213ENST00000436675 LOC100289279A0A1B0GTE1 492 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 A0A1W2PNR3 127 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 A0A1W2PR80 420 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ESYT3A0FGR9 886 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ZNF195O14628 629 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 OIP5O43482 229 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 NUDT14O95848 222 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 INHBAP08476 426 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 LINGO3P0C6S8 592 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ACP2P11117 423 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 PRPS2P11908 318 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 USF1P22415 310 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-213ENST00000436675 IGHV1-2P23083 117 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 GPC1P35052 558 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 OR3A2P47893 321 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 FABP6P51161 128 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ZNF83P51522 516 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 CHRNEQ04844 493 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 GGTLC2Q14390 218 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 CD226Q15762 336 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ZNF678Q5SXM1 525 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 CCNJQ5T5M9 372 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ANKRD26P1Q6NSI1 321 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 GALNT18Q6P9A2 607 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 B3GLCTQ6Y288 498 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 Q6ZT83 130 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 TDRPQ86YL5 185 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 MUC15Q8N387 334 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 TMEM151AQ8N4L1 468 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 C3orf49Q96BT1 292 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 TMEM237Q96Q45 408 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 DHRS9Q9BPW9 319 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
HDAC8-213ENST00000436675 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 KCNF1Q9H3M0 494 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 COQ10BQ9H8M1 238 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 ARFGEF3Q5TH69 2177 aa13.08□□□□□ -0.32
HDAC8-213ENST00000436675 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 SCDO00767 359 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 KCNK2O95069 426 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 NKX2-2O95096 273 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 NGFRP08138 427 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 GGT1P19440 569 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 PHBP35232 272 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 THBS2P35442 1172 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 IMPG1Q17R60 797 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 FAM166AQ6J272 317 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 SLC16A11Q8NCK7 471 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 NUP43Q8NFH3 380 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 PHOSPHO1Q8TCT1 267 aa13.07□□□□□ -0.32
HDAC8-213ENST00000436675 CIDECQ96AQ7 238 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-213ENST00000436675 ZNF300Q96RE9 604 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms