RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 EHFQ9NZC4 300 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 BARX2Q9UMQ3 279 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 NTNG1Q9Y2I2 539 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 MRPS7Q9Y2R9 242 aaKnown RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 STYXL1Q9Y6J8 313 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 DDX49Q9Y6V7 483 aaKnown RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 SPACA6W5XKT8 324 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 NEXMIFQ5QGS0 1516 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 LMTK2Q8IWU2 1503 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 BRD4O60885 1362 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 COL22A1Q8NFW1 1626 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 RGPD1P0DJD0 1748 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 CDC42BPAQ5VT25 1732 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 PXDNQ92626 1479 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 OVOS2A0A0G2JMS6 1433 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 OVOS2A0A0J9YW53 1432 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 OVOS2Q6IE36 1432 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 EIF2AK4Q9P2K8 1649 aaKnown RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 A0A1B0GTH9 108 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 A0A1W2PNV4 684 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 GSAPA4D1B5 854 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZSCAN5CA6NGD5 496 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF487B1APH4 448 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 C11orf98E9PRG8 122 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 K7EQM0 130 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 GALR3O60755 368 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 BCAS1O75363 584 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ANP32DO95626 131 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 HSD17B1P14061 328 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 PGCP20142 388 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 GLRA2P23416 452 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 PSMA2P25787 234 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 PSMA5P28066 241 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 BRCC3P46736 316 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 RGS4P49798 205 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ERVPABLB-1P60509 514 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ACTR1AP61163 376 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 IL24Q13007 206 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 CHI3L2Q15782 390 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 CAMK4Q16566 473 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 TIGITQ495A1 244 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 USH1GQ495M9 461 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ATAD3BQ5T9A4 648 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 FAM71F2Q6NXP2 309 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF600Q6ZNG1 722 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 LANCL3Q6ZV70 420 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 DPY19L4Q7Z388 723 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 BPIFB2Q8N4F0 458 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 M1APQ8TC57 530 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 EMG1Q92979 244 aaKnown RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 C18orf25Q96B23 403 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ELMO2Q96JJ3 720 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF607Q96SK3 696 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 OMDQ99983 421 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 TM2D1Q9BX74 207 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 HCAR1Q9BXC0 346 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 POLR3FQ9H1D9 316 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 OPN3Q9H1Y3 402 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 GORASP2Q9H8Y8 452 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 EXOSC3Q9NQT5 275 aaKnown RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 SMPD3Q9NY59 655 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 SENP1Q9P0U3 644 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 PAK5Q9P286 719 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 COL5A2P05997 1499 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 CHD4Q14839 1912 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 ARHGEF5Q12774 1597 aa2.44□□□□□ -2.02
HMGB1P27-201ENST00000431429 BCL9O00512 1426 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 LAMC1P11047 1609 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CFAP65Q6ZU64 1925 aaKnown RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 GPR89AB7ZAQ6 455 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 H0YCG3 227 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CDX4O14627 284 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 LATO43561 262 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF253O75346 499 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 STX11O75558 287 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 TM7SF2O76062 418 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 IGFBP1P08833 259 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 GPR89BP0CG08 455 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 UMPSP11172 480 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 PRG2P13727 222 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 RPA2P15927 270 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SDC1P18827 310 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 HNF1AP20823 631 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SHC1P29353 583 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 RND3P61587 244 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 RPL8P62917 257 aaKnown RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 GSTO1P78417 241 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CBX1P83916 185 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 PLOD1Q02809 727 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 COX10Q12887 443 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 LPAL2Q16609 132 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CYP51A1Q16850 503 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 MICAQ29983 383 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CCDC57Q2TAC2 916 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CCDC152Q4G0S7 254 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 TTC23Q5W5X9 447 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SEL1L3Q68CR1 1132 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF57Q68EA5 555 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms