RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MAP1BP46821 2468 aaKnown RBP8.14□□□□□ -1.11
SMC6-204ENST00000428868 OR6C70A6NIJ9 312 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 G3V2T6 193 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ADAMDEC1O15204 470 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 HS6ST1O60243 411 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 DPM1O60762 260 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ITGA10O75578 1167 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SOX30O94993 753 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 GADD45GO95257 159 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SNAP29O95721 258 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 CSTAP01040 98 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ALPLP05186 524 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 H1F0P07305 194 aaKnown RBP8.13□□□□□ -1.11
SMC6-204ENST00000428868 CD63P08962 238 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ITGA2P17301 1181 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 MST1P26927 711 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 CD82P27701 267 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 EVI2BP34910 448 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 RYKP34925 604 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 KRT20P35900 424 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 GAS1P54826 345 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 PSMD4P55036 377 aaKnown RBP8.13□□□□□ -1.11
SMC6-204ENST00000428868 TAS2R41P59536 307 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 CLN3Q13286 438 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SKP2Q13309 424 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 GK3PQ14409 553 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 OR1Q1Q15612 314 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ZIK1Q3SY52 487 aaPredicted RBP8.13□□□□□ -1.11
SMC6-204ENST00000428868 FGD3Q5JSP0 725 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 C6orf52Q5T4I8 152 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 GDF7Q7Z4P5 450 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 RAB43Q86YS6 212 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 GRAMD2AQ8IUY3 354 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 OFCC1Q8IZS5 231 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SVOPLQ8N434 492 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SLC5A8Q8N695 610 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 OR10G2Q8NGC3 310 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 PHOSPHO1Q8TCT1 267 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SLC7A13Q8TCU3 470 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 MAGEE2Q8TD90 523 aaPredicted RBP8.13□□□□□ -1.11
SMC6-204ENST00000428868 BRIX1Q8TDN6 353 aaKnown RBP8.13□□□□□ -1.11
SMC6-204ENST00000428868 ADAMTS16Q8TE57 1224 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 RNF138Q8WVD3 245 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 DNAJC9Q8WXX5 260 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 PSMF1Q92530 271 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 PMM1Q92871 262 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SLC41A3Q96GZ6 507 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ZNF597Q96LX8 424 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 ALPK1Q96QP1 1244 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 PRSS27Q9BQR3 290 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 OSBPL10Q9BXB5 764 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 TRIM45Q9H8W5 580 aaPredicted RBP8.13□□□□□ -1.11
SMC6-204ENST00000428868 GALNT9Q9HCQ5 603 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 UBQLN4Q9NRR5 601 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 KLHL28Q9NXS3 571 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 USE1Q9NZ43 259 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 CARD8Q9Y2G2 431 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 PCDHGB5Q9Y5G0 923 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 LOC400499M0QZD8 3231 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 CHD8Q9HCK8 2581 aa8.13□□□□□ -1.11
SMC6-204ENST00000428868 SCDO00767 359 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 NKX2-8O15522 239 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 TLX3O43711 291 aaPredicted RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 CLIC3O95833 236 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 ANGPTL1O95841 491 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 F10P00742 488 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 PRKAR1AP10644 381 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 UBL4AP11441 157 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 HOXB6P17509 224 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 CBLP22681 906 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 POLR2IP36954 125 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 ALDH3A2P51648 485 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 HMGA2P52926 109 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 UGT2B15P54855 530 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 NRG3P56975 720 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 MLF1P58340 268 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 EPS8Q12929 822 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 KCNAB2Q13303 367 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 TAF11Q15544 211 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 INPP5JQ15735 1006 aaPredicted RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 TOMM34Q15785 309 aaPredicted RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 NTRK2Q16620 822 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 MICAQ29983 383 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 ZNF791Q3KP31 576 aaPredicted RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 TBC1D25Q3MII6 688 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 KDM4DQ6B0I6 523 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 ZNF770Q6IQ21 691 aaPredicted RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 FAHD1Q6P587 224 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 PODNL1Q6PEZ8 512 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 IL20RBQ6UXL0 311 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 GALNT5Q7Z7M9 940 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 HIPK1Q86Z02 1210 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 ZDHHC13Q8IUH4 622 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 TAGAPQ8N103 731 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 TMCO5AQ8N6Q1 288 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 PACRGLQ8N7B6 248 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 CATSPER1Q8NEC5 780 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 OR5L2Q8NGL0 311 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms