RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 NKD1Q969G9 470 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 TMCO6Q96DC7 493 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 CNBD2Q96M20 576 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 ZNF570Q96NI8 536 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 TOR3AQ9H497 397 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 DLL3Q9NYJ7 618 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 NTNG1Q9Y2I2 539 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 CFAP54Q96N23 3096 aa13.88□□□□□ -0.19
GINS3-203ENST00000426538 A0A1W2PQD3 144 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.87□□□□□ -0.19
GINS3-203ENST00000426538 H0YAE9 185 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 ZNF264O43296 627 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 NDUFB5O43674 189 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 BCAS1O75363 584 aaPredicted RBP13.87□□□□□ -0.19
GINS3-203ENST00000426538 OR2J2O76002 312 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 HPP00738 406 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 RYKP34925 604 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 CAPGP40121 348 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 COPZ1P61923 177 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 TTC23Q5W5X9 447 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 DESI1Q6ICB0 168 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 PODNL1Q6PEZ8 512 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 GDF7Q7Z4P5 450 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 RAB43Q86YS6 212 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 SLC15A4Q8N697 577 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 TOR1AIP2Q8NFQ8 470 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 OR5M3Q8NGP4 307 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 KIAA1143Q96AT1 154 aaPredicted RBP13.87□□□□□ -0.19
GINS3-203ENST00000426538 PSD2Q9BQI7 771 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 TRIM2Q9C040 744 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 WDR70Q9NW82 654 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 PCDHGA6Q9Y5G7 932 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 DMXL1Q9Y485 3027 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 ALG1L2C9J202 215 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 TERTO14746 1132 aaKnown RBP13.87□□□□□ -0.19
GINS3-203ENST00000426538 GASTP01350 101 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 EVI2BP34910 448 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 IFNGR2P38484 337 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 PLAURQ03405 335 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 SEC23BQ15437 767 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 IGF2-ASQ6U949 168 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 APOOLQ6UXV4 268 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 NUP54Q7Z3B4 507 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 PAPOLBQ9NRJ5 636 aaKnown RBP13.87□□□□□ -0.19
GINS3-203ENST00000426538 MAN2C1Q9NTJ4 1040 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 FAM118AQ9NWS6 357 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 P4HTMQ9NXG6 502 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 SELENONQ9NZV5 590 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 RPS6KB2Q9UBS0 482 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 FBXL4Q9UKA2 621 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 SLC7A7Q9UM01 511 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 MGAT4BQ9UQ53 548 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 CARD8Q9Y2G2 431 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 POFUT2Q9Y2G5 429 aa13.87□□□□□ -0.19
GINS3-203ENST00000426538 CNOT1A5YKK6 2376 aaKnown RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 GVINP1Q7Z2Y8 2422 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 MITFO75030 526 aaPredicted RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 ITGA10O75578 1167 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 NADKO95544 446 aaPredicted RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 CELA2AP08217 269 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 LINGO3P0C6S8 592 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 POU2F1P14859 743 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 HTR2AP28223 471 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 ACAA2P42765 397 aaKnown RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 FBXW4P57775 412 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 PDK3Q15120 406 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 CD226Q15762 336 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 FNDC7Q5VTL7 733 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 KRT80Q6KB66 452 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 ZNF613Q6PF04 617 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 ZNF730Q6ZMV8 503 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 MARCH3Q86UD3 253 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 MARVELD2Q8N4S9 558 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 TMCO5AQ8N6Q1 288 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 LSMEM1Q8N8F7 131 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 POGLUT1Q8NBL1 392 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 TTC9Q92623 222 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 GTPBP3Q969Y2 492 aaKnown RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 IP6K3Q96PC2 410 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 RASL10BQ96S79 203 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 FUZQ9BT04 418 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 ANKRD60Q9BZ19 345 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 RIBC2Q9H4K1 309 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 GPN2Q9H9Y4 310 aaPredicted RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 ENOPH1Q9UHY7 261 aa13.86□□□□□ -0.19
GINS3-203ENST00000426538 YARS2Q9Y2Z4 477 aaKnown RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 MRPS18BQ9Y676 258 aaKnown RBP13.86□□□□□ -0.19
GINS3-203ENST00000426538 A0A087WUU8 490 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 LOC100130705A0A1B0GUX0 176 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 FADS1O60427 444 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 ZNF354AO60765 605 aaPredicted RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 ANGPTL1O95841 491 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 CCR4P51679 360 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 ADARB1P78563 741 aaKnown RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 KCNAB2Q13303 367 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms