RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SLC29A4Q7RTT9 530 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 CHERPQ8IWX8 916 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 C9orf40Q8IXQ3 194 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 CLIP4Q8N3C7 705 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 MARVELD2Q8N4S9 558 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 DHRSXQ8N5I4 330 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 ZNF614Q8N883 585 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 ATG16L2Q8NAA4 619 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 OR10G2Q8NGC3 310 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 GIPC3Q8TF64 312 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 PHF10Q8WUB8 498 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 PSMF1Q92530 271 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 LCORQ96JN0 433 aaPredicted RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 LPAR4Q99677 370 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 SEMA4CQ9C0C4 833 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 ACER3Q9NUN7 267 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 RLIMQ9NVW2 624 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 KCNE5Q9UJ90 142 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 RALYQ9UKM9 306 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 ACAD8Q9UKU7 415 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 A4GNTQ9UNA3 340 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 C2orf92A0A1B0GVN3 265 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 PRKNO60260 465 aaPredicted RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 PDGFAP04085 211 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 ICAM2P13598 275 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 ITGA3P26006 1051 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 CAPGP40121 348 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 LIMS1P48059 325 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 DAPP51397 102 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 RAD23AP54725 363 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 SLC26A5P58743 744 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 DCAF7P61962 342 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 EPS8Q12929 822 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 FOXD4Q12950 439 aaPredicted RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 RAPSNQ13702 412 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 PDK3Q15120 406 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 DECR1Q16698 335 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTN-202ENST00000393083 RFX4Q33E94 735 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 PDZK1Q5T2W1 519 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 TFAP2CQ92754 450 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 THOC3Q96J01 351 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 DHRS1Q96LJ7 313 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 LMF1Q96S06 567 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 SMAD5Q99717 465 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 WWTR1Q9GZV5 400 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 LHPPQ9H008 270 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 TOR3AQ9H497 397 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 GPR83Q9NYM4 423 aa12.47□□□□□ -0.41
PTN-202ENST00000393083 TMEFF2Q9UIK5 374 aaPredicted RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
PTN-202ENST00000393083 PIEZO2Q9H5I5 2752 aa12.46□□□□□ -0.41
PTN-202ENST00000393083 AP3D1O14617 1153 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 CCNB2O95067 398 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 UBTFL6P0CB48 400 aaPredicted RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 ITGAMP11215 1152 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 DRD5P21918 477 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 FUT4P22083 530 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 GPR143P51810 404 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 PSMD4P55036 377 aaKnown RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 SMIM11AP58511 58 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 TAS2R41P59536 307 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 IL1RL1Q01638 556 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 PIN1Q13526 163 aaPredicted RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 EXT1Q16394 746 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 MICAQ29983 383 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 BTBD16Q32M84 506 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 SLC36A3Q495N2 470 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 SOWAHCQ53LP3 525 aaPredicted RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 AP1ARQ63HQ0 302 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 KDM4DQ6B0I6 523 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 FAHD1Q6P587 224 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 PLEKHM3Q6ZWE6 761 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 GALNT5Q7Z7M9 940 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 PIK3C3Q8NEB9 887 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 B3GNT7Q8NFL0 401 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 M1APQ8TC57 530 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 NR4A3Q92570 626 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 EFHD2Q96C19 240 aaPredicted RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 ALPK1Q96QP1 1244 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 MBOAT4Q96T53 435 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 FNDC11Q9BVV2 318 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 ANKRD60Q9BZ19 345 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 ARMC7Q9H6L4 198 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 NMNAT1Q9HAN9 279 aaPredicted RBP12.46□□□□□ -0.42
PTN-202ENST00000393083 MMP25Q9NPA2 562 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 CTPS2Q9NRF8 586 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 KRT84Q9NSB2 600 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 TMCC3Q9ULS5 477 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 ATRXP46100 2492 aa12.46□□□□□ -0.42
PTN-202ENST00000393083 SMG1Q96Q15 3661 aaKnown RBP12.45□□□□□ -0.42
PTN-202ENST00000393083 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
PTN-202ENST00000393083 CDHR4A6H8M9 788 aa12.45□□□□□ -0.42
PTN-202ENST00000393083 CPSF4LA6NMK7 179 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms