RNA–Protein interactions for RNA: ENST00000390987.1

RNA5SP339-201, Transcript of RNA, 5S ribosomal pseudogene 339, humanhuman

BASIC

Gene RNA5SP339, Length 122 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP339-201ENST00000390987 SPG11Q96JI7 2443 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NUP214P35658 2090 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 A0A096LPI6 279 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NPIPA5A0A0B4J1W7 369 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SERINC4A6NH21 518 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 FAM90A27PA6NNH2 459 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CLCA1A8K7I4 914 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NPIPA7E9PJI5 369 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RFXANKO14593 260 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 HNRNPRO43390 633 aaKnown RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 FCMRO60667 390 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 STX11O75558 287 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 UGT2B17O75795 530 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TNFSF13O75888 250 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CHRM4P08173 479 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NPIPA8P0DM63 369 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 BMP2P12643 396 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 PRF1P14222 555 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 PRKCAP17252 672 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 HK1P19367 917 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 POU3F2P20265 443 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CAPN3P20807 821 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 MATN1P21941 496 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CHI3L1P36222 383 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ZNF41P51814 821 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 POLR2JP52435 117 aaKnown RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ZNF136P52737 540 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ATP12AP54707 1039 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CLDN20P56880 219 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 STX1BP61266 288 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 FOXF1Q12946 379 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SQLEQ14534 574 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 GUSBP1Q15486 140 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 MAPK11Q15759 364 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 HSPB2Q16082 182 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 MAPK14Q16539 360 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CTU2Q2VPK5 515 aaKnown RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NDUFAF6Q330K2 333 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SLC25A53Q5H9E4 307 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 COX20Q5RI15 118 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 PDZK1Q5T2W1 519 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 LRIF1Q5T3J3 769 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CGB2Q6NT52 195 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TNFAIP8L2Q6P589 184 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CBLN3Q6UW01 205 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 FRRS1Q6ZNA5 592 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 C16orf62Q7Z3J2 963 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RNF130Q86XS8 419 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CCDC71Q8IV32 467 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 LIX1LQ8IVB5 337 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 FUNDC1Q8IVP5 155 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 MSRB3Q8IXL7 192 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 METTL25Q8N6Q8 603 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 C9orf106Q8NAJ2 232 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 GATSQ8NAP1 163 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TOR1AIP2Q8NFQ8 470 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TNIP2Q8NFZ5 429 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 B4GALNT2Q8NHY0 566 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 POC1BQ8TC44 478 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ZFP90Q8TF47 636 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 GTF2H4Q92759 462 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RAB8BQ92930 207 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 WNT2BQ93097 391 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 MARVELD3Q96A59 401 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ROPN1LQ96C74 230 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SH3YL1Q96HL8 342 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ITCHQ96J02 903 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ADGRG7Q96K78 797 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RNF145Q96MT1 663 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ZFP3Q96NJ6 502 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TRNT1Q96Q11 434 aaKnown RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 TRIB1Q96RU8 372 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NPAS1Q99742 590 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SPOCK3Q9BQ16 436 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 PIGQQ9BRB3 760 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SFXN3Q9BWM7 321 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 PAIP1Q9H074 479 aaKnown RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ENKD1Q9H0I2 346 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SLC38A1Q9H2H9 487 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RUBCNLQ9H714 662 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RNF122Q9H9V4 155 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CALHM2Q9HA72 323 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 NPHS2Q9NP85 383 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 EXOSC3Q9NQT5 275 aaKnown RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 EXD2Q9NVH0 621 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 SLC25A37Q9NYZ2 338 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 MED11Q9P086 117 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ZNF629Q9UEG4 869 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 PCDHGB4Q9UN71 923 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 CAMK2AQ9UQM7 478 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 LIPT1Q9Y234 373 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 VDAC3Q9Y277 283 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 RPH3AQ9Y2J0 694 aaPredicted RBP4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 ZNF175Q9Y473 711 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 DTNAQ9Y4J8 743 aa4.87□□□□□ -1.63
RNA5SP339-201ENST00000390987 AP4B1Q9Y6B7 739 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms