RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 FMO6PO60774 539 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MRPS14O60783 128 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC22O60826 627 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF5BO60841 1220 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KINO60870 393 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAMP3O60896 148 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TBL1XO60907 577 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CTNSO60931 367 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MITFO75030 526 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ICOSLGO75144 302 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HIP1RO75146 1068 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 COQ9O75208 318 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDH16O75309 829 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SNNO75324 88 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ENTPD6O75354 484 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ENTPD5O75356 428 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AVILO75366 819 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SH3BGRLO75368 114 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF737O75373 536 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PEX14O75381 377 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPAG7O75391 227 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDC45O75419 566 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TADA2AO75478 443 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SUPT3HO75486 399 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLDN11O75508 207 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ECI2O75521 394 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SKAP2O75563 359 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MTRF1O75570 445 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PGLYRP1O75594 196 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GCATO75600 419 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPAG6O75602 509 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LYPLA1O75608 230 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UPK3AO75631 287 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SERPINB7O75635 380 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TIPRLO75663 272 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SURF6O75683 361 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC25A12O75746 678 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAD51DO75771 328 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PALMO75781 387 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RHBDL1O75783 438 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RNASEH2AO75792 299 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDC123O75794 336 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF3GO75821 320 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZMPSTE24O75844 475 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RBBP9O75884 186 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STAM2O75886 525 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFSF13O75888 250 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MMP23AO75900 390 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BCAS2O75934 225 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LYZL6O75951 148 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TSPAN9O75954 239 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FLOT1O75955 427 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2J3O76001 311 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLPXO76031 633 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF8O76064 485 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CIAO1O76071 339 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PDE5AO76074 875 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BEST1O76090 585 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR7A10O76100 309 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LY6HO94772 140 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STK10O94804 968 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GFPT2O94808 682 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TPPPO94811 219 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BAIAP3O94812 1187 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GLCEO94923 617 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLSTN1O94985 981 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2F2O95006 317 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR4F21O95013 312 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNK2O95069 426 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NKX2-2O95096 273 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MFN2O95140 757 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AKR7A3O95154 331 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NXPH2O95156 264 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDRT1O95170 752 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SCELO95171 688 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFA7O95182 113 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KLHL2O95198 593 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RCBTB2O95199 551 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZWINTO95229 277 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LUC7L3O95232 432 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 APOL3O95236 402 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GOSR1O95249 250 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCNDBP1O95273 360 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PGLSO95336 258 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FARS2O95363 451 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLU7O95391 586 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BMP10O95393 424 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UTS2O95399 124 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TGDSO95455 350 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CTDNEP1O95476 244 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRAMEF12O95522 483 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ETHE1O95571 254 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STAMBPO95630 424 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT75O95678 551 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 POP4O95707 220 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HSPA4LO95757 839 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PTBP3O95758 552 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IL33O95760 270 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF682O95780 498 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GNA14O95837 355 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms