RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 INTS6Q9UL03 887 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 PLSCR5A0PG75 271 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 EIF4EP06730 217 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 RPS5P46782 204 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 HOXA1P49639 335 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 DIO3P55073 304 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SNTB1Q13884 538 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 PAFAH1B3Q15102 231 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 PPP1R3AQ16821 1122 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 C10orf90Q96M02 699 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SIDT1Q9NXL6 827 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 ANKMY1Q9P2S6 941 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 KIDINS220Q9ULH0 1771 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PRSS44E7EML9 344 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SLC6A19Q695T7 634 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SH3RF2Q8TEC5 729 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 RAB7BQ96AH8 199 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 ANKRD9Q96BM1 317 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 KAZALD1Q96I82 304 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 GLIS2Q9BZE0 524 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 TO15178 435 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 S100A8P05109 93 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 GCH1P30793 250 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 TECRLQ5HYJ1 363 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 FBXL22Q6P050 247 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 C19orf35Q6ZS72 473 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PLD6Q8N2A8 252 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 KATNB1Q9BVA0 655 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 MEIS3P2A8K0S8 358 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 CIDEAO60543 219 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 UBL4AP11441 157 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 HTR3AP46098 478 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 RAB7AP51149 207 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 RNLSQ5VYX0 342 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 Q6ZVU0 165 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PRAP1Q96NZ9 151 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 B4DXG7 233 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 EFNA3P52797 238 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 CLDN6P56747 220 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SLC14A1Q13336 389 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 ZNF454Q8N9F8 522 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 WIF1Q9Y5W5 379 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 CEPT1Q9Y6K0 416 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SLX4Q8IY92 1834 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 TCRBV7S3A2A0A539 114 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 H7BY64 318 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 HOXD11P31277 338 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 AGTR2P50052 363 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 ZNF791Q3KP31 576 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 OTOP2Q7RTS6 562 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 FAM213BQ8TBF2 198 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 LRIG1Q96JA1 1093 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 ZNF160Q9HCG1 818 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 CHRNA9Q9UGM1 479 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 NUP188Q5SRE5 1749 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 DUSP3P51452 185 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 CLDN19Q8N6F1 224 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 LFNGQ8NES3 379 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 CYB5D2Q8WUJ1 264 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 CACNA1CQ13936 2221 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 B3GALNT1O75752 331 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 PSMB3P49720 205 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 NOGQ13253 232 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 SOX17Q9H6I2 414 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 TSPAN6O43657 245 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GPR37L1O60883 481 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GALNT2Q10471 571 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 MAP4K2Q12851 820 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 ARHGEF15O94989 841 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 CD53P19397 219 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 PRDX3P30048 256 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 RANP62826 216 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 TMEM115Q12893 351 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 PRRT3Q5FWE3 981 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 ISYNA1Q9NPH2 558 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 SLC22A11Q9NSA0 550 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 NUP205Q92621 2012 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 TMEM82A0PJX8 343 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 PPP5D1E7EU14 171 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 DUX1O43812 170 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 LCATP04180 440 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 INHAP05111 366 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 JUPP14923 745 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GRB7Q14451 532 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GMEB2Q9UKD1 530 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 POM121CA8CG34 1229 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 SEMG2Q02383 582 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 SLC22A6Q4U2R8 563 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 RBMXL3Q8N7X1 1067 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 CLEC4CQ8WTT0 213 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 ADAMTS14Q8WXS8 1223 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 STEAP1Q9UHE8 339 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 DVL1O14640 695 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 FGF3P11487 239 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 HNF1BP35680 557 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 DVL1P1P54792 670 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 ID2Q02363 134 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 HNF4GQ14541 408 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms