RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Znf668Q8K2R5 619 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 0610009B22RikQ8R3W2 140 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr357Q8VFP4 308 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gpr88Q9EPB7 384 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ndrg3Q9QYF9 375 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dkkl1Q9QZL9 230 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Loxl3Q9Z175 754 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm6096D3YTY6 151 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 St3gal3P97325 374 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Prrt3Q6PE13 971 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Sox11Q7M6Y2 395 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gas2l1Q8JZP9 678 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Irak3Q8K4B2 609 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 BcorQ8CGN4 1759 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm28710A0A1B0GR31 962 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Mpeg1A1L314 713 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cox4i1P19783 169 aaKnown RBP15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nat3P50296 290 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 StarP51557 284 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Otop1Q80VM9 600 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cfap20Q8BTU1 193 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r222Q8R269 308 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pycr1Q922W5 309 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 CmipQ9D486 773 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 1700018B08RikQ9DA83 213 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr710Q9EP55 310 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp993A2A8V4 313 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Lrrc3P59034 257 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm14226Q3TZL0 686 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 B3gnt6Q3USF0 391 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 SctrQ5FWI2 447 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Sgk494Q5SYL1 278 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Irf4Q64287 450 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1161Q7TR29 321 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr594Q7TRR4 311 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr285Q7TS17 319 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Phospho1Q8R2H9 267 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1232Q8VEX7 311 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Q9DAR0 182 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 A26c2A0A140LHE4 291 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 SpaarA0A1B0GSZ0 75 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 MstnO08689 376 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rab3aP63011 220 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1287Q7TQY1 305 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tgif2Q8C0Y1 237 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Lyrm4Q8K215 91 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tram2Q924Z5 370 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cav2Q9WVC3 162 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 P20040 264 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Apoc2Q05020 97 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Leng9Q8BTN6 485 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vash1Q8C1W1 375 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Oard1Q8R5F3 152 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1217Q8VGG1 304 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 OcstampQ9D611 498 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 2010109A12RikQ9D875 119 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Yae1d1Q9DAY6 216 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1130A0A1L1SQT2 314 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp534A2A7A1 661 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1129A2AV41 314 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dcp1bQ3U564 578 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Six4Q61321 775 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Arhgef39Q66JY6 344 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr340Q8VGL0 312 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ubr2Q6WKZ8 1755 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Camta1A2A891 1682 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Eci1P42125 289 aaKnown RBP15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dlx5P70396 289 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pde12Q3TIU4 608 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr463Q5SW49 311 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr462Q5SW50 311 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pcyt1bQ811Q9 369 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r188Q8K3N2 308 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Coro6Q920M5 471 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 CsprsQ99388 208 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dnajb11Q99KV1 358 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 FggyA2AJL3 552 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Bmp7P23359 430 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Paqr7Q80ZE4 345 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfand2bQ91X58 257 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Skint8A7XV07 398 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 NlkO54949 527 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Enpp1P06802 906 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 PrkcgP63318 697 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nt5eQ61503 576 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 CcinQ8CDE2 588 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Slc5a11Q8K0E3 673 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 FbrsQ8R089 466 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rgs21V9GXQ3 152 aa15.74■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Spire1Q52KF3 598 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Usp17laQ61068 526 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tigd3Q7TM95 470 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ppp1r8Q8R3G1 351 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ccr10Q9JL21 362 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm13102A2ASJ3 519 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr331Q5NC44 324 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Hfe2Q7TQ32 420 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr514Q8VFZ6 310 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 F11Q91Y47 624 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Coq5Q9CXI0 327 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms