RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Hist1h2acC0HKE2 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2adC0HKE3 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2aeC0HKE4 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2agC0HKE5 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2aiC0HKE6 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2anC0HKE7 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2aoC0HKE8 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2apC0HKE9 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Aldh3b2E9Q3E1 479 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 AdaP03958 352 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Klkb1P26262 638 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Limk1P53668 647 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gfi1P70338 423 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Taf1aP97357 453 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Foxred1Q3TQB2 487 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Entpd6Q3U0P5 455 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Crtc2Q3U182 692 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ccdc190Q3URK1 288 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Prkg2Q61410 762 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tas2r140Q7TQA4 312 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ap4e1Q80V94 1122 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist3h2aQ8BFU2 130 aaKnown RBP10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc38a9Q8BGD6 560 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2afQ8CGP5 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2ahQ8CGP6 128 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hist1h2akQ8CGP7 130 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Defb35Q8R2I3 63 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr1033Q8VFK5 310 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr1090Q8VGA6 313 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Arrb2Q91YI4 410 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Exo5Q9CXP9 373 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Trmt5Q9D0C4 501 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Med11Q9D8C6 117 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tspan4Q9DCK3 238 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 RhouQ9EQT3 261 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ulk2Q9QY01 1037 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dnajb1Q9QYJ3 340 aaKnown RBP10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ate1Q9Z2A5 516 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Itgb4A2A863 1818 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Lrrc72A0A1Y7VMI0 288 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cela3aA2A9U8 283 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zfp282E9PVC2 666 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm8159E9Q0R1 267 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Bhlhe40O35185 411 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cacng1O70578 223 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fabp1P12710 127 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 AcadlP51174 430 aaKnown RBP10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rras2P62071 204 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cep76Q0VEJ0 659 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fut4Q11127 433 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 NotumQ8R116 503 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Q8R3C1 574 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr215Q8VF82 310 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Pcdhga12Q91XY7 932 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tinagl1Q99JR5 466 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Col25a1Q99MQ5 666 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mospd2Q9CWP6 518 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 PigkQ9CXY9 395 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 TrilQ9DBY4 809 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Skint2A7XUX6 400 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm1330D3Z460 184 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Chst13D3Z6E3 336 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gsg1lD3Z7H4 322 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zfp141G3UY09 685 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Vmn1r16K7N775 303 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr1221L7MU53 311 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Agpat1O35083 285 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Apoa2P09813 102 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 CfpP11680 464 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tnfrsf4P47741 272 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 MybphP70402 483 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Uap1l1Q3TW96 507 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Klhl21Q3U410 597 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gpr75Q6X632 540 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Kctd7Q8BJK1 289 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Nlgn3Q8BYM5 825 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mettl21eQ8CDZ2 244 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Utp4Q8R2N2 686 aaKnown RBP10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr308Q8VFP2 308 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cacng6Q8VHW3 260 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 1700086D15RikQ9D9E9 151 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 Aldh7a1Q9DBF1 539 aa10.23□□□□□ -0.77
Msh3-201ENSMUST00000022220 D3Ertd254eA0A0G2JEM5 796 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm13078A2AGW8 474 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Aadacl2B2RWD2 401 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm10112D3YWP5 117 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zfp54E9PW05 585 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm9493F6SVV1 192 aaKnown RBP10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 P01668 110 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tbx6P70327 436 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hif3aQ0VBL6 662 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 2410002F23RikQ3TE80 284 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 FcrlbQ5DRQ8 427 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rnase12Q5GAM8 145 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 MuskQ61006 868 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Krba1Q6NXZ1 1043 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gstm7Q80W21 218 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Agfg2Q80WC7 479 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mab21l2Q8BPP1 359 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ssuh2Q8C3L1 340 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms