RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Mblac2Q8BL86 279 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Ssuh2Q8C3L1 340 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Vmn1r71Q8VIC0 307 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Sntg1Q925E1 517 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 SostQ99P68 211 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Lcn9Q9D267 178 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Mbd3l1Q9D9H3 186 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Cyp2d22Q9JKY7 500 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Syt11Q9R0N3 430 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Cldn6Q9Z262 219 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 PvrigA0A1B0GS01 234 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Pcdh1F7BJK1 1077 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Tgfb3P17125 410 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Gja4P28235 333 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Gng2P63213 71 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 FuzQ3UYI6 415 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 BC030870Q3V2G4 71 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Nlrc3Q5DU56 1064 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 RflnbQ5SVD0 216 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 PcnpQ6P8I4 178 aaKnown RBP15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Spns1Q8R0G7 528 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Vmn1r32Q8R2D9 302 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr1226Q8VGM5 310 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Q91W34 466 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 2410137M14RikQ9CWF0 162 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Eral1Q9CZU4 437 aaKnown RBP15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Dgat2Q9DCV3 388 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Hipk2Q9QZR5 1196 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Heatr5bQ8C547 2070 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr746E9Q840 314 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Stxbp1O08599 594 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 CgaP01216 120 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Zfp60P16374 707 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc1a3P56564 543 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 MamstrQ0ZCJ7 421 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Crtc2Q3U182 692 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Arhgef9Q3UTH8 516 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Fzd3Q61086 666 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Eri3Q8C460 337 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Aoc1Q8JZQ5 751 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Cd209dQ91ZW8 237 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Cstf1Q99LC2 431 aaKnown RBP15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Ca7Q9ERQ8 264 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Tssc4Q9JHE7 317 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Lmx1aQ9JKU8 382 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Cacna1eQ61290 2272 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Ppp1r3dA2AJW4 279 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Nlgn4lB0F2B4 945 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 ChadlE9Q7T7 748 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 IghgP01863 330 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Hoxd9P28357 339 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Cdh26P59862 763 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Bmp1P98063 991 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Vwa5b2Q3UR50 1248 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Zfp866Q6PGD2 520 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Gstm7Q80W21 218 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Mgat4bQ812F8 548 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Atg4bQ8BGE6 393 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Catsper4Q8BVN3 442 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Hdac8Q8VH37 377 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc35b3Q922Q5 369 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Nrip3Q9JJR9 240 aa15.36■□□□□ 0.05
Shh-201ENSMUST00000002708 Unc13cQ8K0T7 2210 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Gm7145A0A087WS64 360 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Mamdc4A2AJA7 1228 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr1056A2AVY0 313 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Zfp949E9Q732 603 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Dscr3O35075 297 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Rnf13O54965 381 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Mc3rP33033 323 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Stfa2P35174 103 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 SmsP97355 366 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Pitx2P97474 317 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Mat2aQ3THS6 395 aaKnown RBP15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Arhgef39Q66JY6 344 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Krba1Q6NXZ1 1043 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Dcaf12l2Q8BGW4 469 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Q8BHB7 409 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Fam92aQ8BP22 355 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 B130006D01RikQ8BRH6 153 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Hat1Q8BY71 416 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Dync2li1Q8K0T2 351 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Swi5Q8K3D3 89 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Osgin1Q8VC10 478 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Oas3Q8VI93 1138 aaKnown RBP15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Fitm1Q91V79 292 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 ScgnQ91WD9 276 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Bud23Q9CY21 281 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 MtpapQ9D0D3 585 aaKnown RBP15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Sertad3Q9ERC3 197 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 IghdA0A0A6YW14 291 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Igkv6-29A0A0G2JEI6 115 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Sac3d1A6H687 427 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Cd101A8E0Y8 1033 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr172E9Q8F6 309 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Gm4141K9J7H2 306 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 CtnsP57757 367 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Coq8aQ60936 645 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 PmlQ60953 885 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Kctd7Q8BJK1 289 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms