RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 GPATCH2Q9NW75 528 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 CLCF1Q9UBD9 225 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 L3MBTL1Q9Y468 752 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 AP4B1Q9Y6B7 739 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 NPIPA5A0A0B4J1W7 369 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 RNF103-CHMP3A0A140T963 221 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 PRSS51A0A1B0GVH4 220 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 A0A1W2PQD3 144 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 DUXAA6NLW8 204 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 SHISA8B8ZZ34 492 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 NPIPA7E9PJI5 369 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 SLCO1B7G3V0H7 640 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.41
PNKP-228ENST00000637325 HDAC3O15379 428 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 HCRTR2O43614 444 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 TGM6O95932 706 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 NPIPA8P0DM63 369 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 S100A3P33764 101 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 CPA2P48052 419 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 NME5P56597 212 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 KRTAP10-9P60411 292 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 FOXF2Q12947 444 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 CASP8Q14790 479 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 SGCBQ16585 318 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 FBXL19-AS1Q494R0 122 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 FLYWCH1Q4VC44 716 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 NXNQ6DKJ4 435 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 OR2A2Q6IF42 318 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 SPATA19Q7Z5L4 167 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 MTERF4Q7Z6M4 381 aaKnown RBP12.46□□□□□ -0.41
PNKP-228ENST00000637325 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 ZZZ3Q8IYH5 903 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 ZNF614Q8N883 585 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 OR5D16Q8NGK9 328 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 RAB3IL1Q8TBN0 382 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 TLCD1Q96CP7 247 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 SH3GL2Q99962 352 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 PINK1Q9BXM7 581 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 KCNE3Q9Y6H6 103 aa12.46□□□□□ -0.41
PNKP-228ENST00000637325 PDZD2O15018 2839 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 GOLGA8QA0A0J9YX86 632 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 GOLGA8OA6NCC3 632 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 GOLGA8NF8WBI6 632 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 SDHDO14521 159 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 SNNO75324 88 aaPredicted RBP12.45□□□□□ -0.42
PNKP-228ENST00000637325 TNFRSF21O75509 655 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 NUDT14O95848 222 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 ZNF17P17021 662 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 UQCRC2P22695 453 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 SUCLG1P53597 346 aaKnown RBP12.45□□□□□ -0.42
PNKP-228ENST00000637325 ATP12AP54707 1039 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 RPS26P62854 115 aaKnown RBP12.45□□□□□ -0.42
PNKP-228ENST00000637325 DPY19L1Q2PZI1 675 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 SPANXN4Q5MJ08 99 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 AGBL2Q5U5Z8 902 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 OGFOD2Q6N063 350 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 PPP4R4Q6NUP7 873 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 LUZP2Q86TE4 346 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 WDR75Q8IWA0 830 aaKnown RBP12.45□□□□□ -0.42
PNKP-228ENST00000637325 CLEC4FQ8N1N0 589 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 CNEP1R1Q8N9A8 125 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 ACTRT2Q8TDY3 377 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 ZBTB8AQ96BR9 441 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 TESCQ96BS2 214 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 ZBTB18Q99592 522 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 RBM24Q9BX46 236 aaKnown RBP12.45□□□□□ -0.42
PNKP-228ENST00000637325 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 PIGMQ9H3S5 423 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 MED17Q9NVC6 651 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 EXD2Q9NVH0 621 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 ITGB1BP2Q9UKP3 347 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 CSMD1Q96PZ7 3565 aa12.45□□□□□ -0.42
PNKP-228ENST00000637325 E9PBE3 544 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 H0YC42 278 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 EIF1AYO14602 144 aaKnown RBP12.44□□□□□ -0.42
PNKP-228ENST00000637325 AGR2O95994 175 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 AK1P00568 194 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 ME2P23368 584 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 EPHA3P29320 983 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 CHI3L1P36222 383 aaPredicted RBP12.44□□□□□ -0.42
PNKP-228ENST00000637325 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
PNKP-228ENST00000637325 CASP9P55211 416 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
PNKP-228ENST00000637325 CLDN15P56746 228 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 CLDN20P56880 219 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 UFM1P61960 85 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 CD226Q15762 336 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 FAM174BQ3ZCQ3 159 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 KLHL26Q53HC5 615 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 ATAD3BQ5T9A4 648 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 C16orf62Q7Z3J2 963 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 FAM222BQ8WU58 562 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 FIG4Q92562 907 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 SDF2Q99470 211 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 WDR55Q9H6Y2 383 aaPredicted RBP12.44□□□□□ -0.42
PNKP-228ENST00000637325 AIG1Q9NVV5 245 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms