RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PDE7BQ9NP56 450 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PRMT8Q9NR22 394 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 CTXN1P60606 82 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SQSTM1Q13501 440 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 CDHR3Q6ZTQ4 885 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 IL17RDQ8NFM7 739 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 NPLOC4Q8TAT6 608 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ZFP90Q8TF47 636 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SMAP2Q8WU79 429 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 TM9SF4Q92544 642 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 RAB7BQ96AH8 199 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 WDR92Q96MX6 357 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 JMJD7P0C870 316 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SRYQ05066 204 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 KEAP1Q14145 624 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 MELKQ14680 651 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF169Q14929 603 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PRAMEF8Q5VWM4 474 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PRAMEF7Q5VXH5 474 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 KCNIP4Q6PIL6 250 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 MYLIPQ8WY64 445 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 IRF7Q92985 503 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ZMYND19Q96E35 227 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 TESQ9UGI8 421 aaKnown RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 IGLON5A6NGN9 336 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 TNFRSF1BP20333 461 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PRKAR1BP31321 381 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PGGT1BP53609 377 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ZFP82Q8N141 532 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 B4GAT1O43505 415 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ATE1O95260 518 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 MPIG6BO95866 241 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 GSTM4Q03013 218 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 EEF1A1P5Q5VTE0 462 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 LARP4Q71RC2 724 aaKnown RBP eCLIP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SULF2Q8IWU5 870 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 FOXRED1Q96CU9 486 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SERTAD4Q9NUC0 356 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 GJD2Q9UKL4 321 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 FBXO7Q9Y3I1 522 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 A0A1W2PP55 124 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 P2RX6O15547 441 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PEX14O75381 377 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 LMAN2Q12907 356 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 CNKSR3Q6P9H4 555 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 UMODL1-AS1Q8N2C9 162 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 GPR148Q8TDV2 347 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 NMNAT1Q9HAN9 279 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SDR39U1Q9NRG7 319 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 HAPLN1P10915 354 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 UBE2NP61088 152 aaKnown RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 MEX3BQ6ZN04 569 aaKnown RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 TMEM135Q86UB9 458 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 LIX1LQ8IVB5 337 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PINK1Q9BXM7 581 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 DPH1Q9BZG8 443 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ACTR10Q9NZ32 417 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 DCDC2BA2VCK2 349 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 OR6C65A6NJZ3 312 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 EFCAB7A8K855 629 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 PLSCR1O15162 318 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 STK17BO94768 372 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 DEFA6Q01524 100 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 ACY1Q03154 408 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 LRRC28Q86X40 367 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SLC19A3Q9BZV2 496 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 IGSF5Q9NSI5 407 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SGCEO43556 437 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 RAD1O60671 282 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 MED6O75586 246 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SYPP08247 313 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SSTR2P30874 369 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 RAB28P51157 221 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 RPL23AP62750 156 aaKnown RBP9.07□□□□□ -0.96
CSMD1-217ENST00000602723 BTN1A1Q13410 526 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 BRIX1Q8TDN6 353 aaKnown RBP9.07□□□□□ -0.96
CSMD1-217ENST00000602723 HAVCR2Q8TDQ0 301 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 MTHFD2LQ9H903 347 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SLC7A7Q9UM01 511 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 DLX2Q07687 328 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF551Q7Z340 670 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-217ENST00000602723 PRR18Q8N4B5 295 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF417Q8TAU3 575 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 ELP4Q96EB1 424 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SIGLEC1Q9BZZ2 1709 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 LOC102723532A0A0G2JNH3 316 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 A0A1W2PQ09 198 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 MEIS3P1A6NDR6 274 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 CPNE6O95741 557 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 TAP2Q03519 686 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 RING1Q06587 406 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 P2RY14Q15391 338 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 CCL14Q16627 93 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 CLECL1Q8IZS7 167 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 OR9A4Q8NGU2 314 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 ADAMTS18Q8TE60 1221 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 LRIG1Q96JA1 1093 aa9.07□□□□□ -0.96
CSMD1-217ENST00000602723 SDHAF2Q9NX18 166 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms