RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZNF148Q9UQR1 794 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 CPAMD8Q8IZJ3 1885 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 VPS13CQ709C8 3753 aa4.4□□□□□ -1.71
ATXN3-228ENST00000554592 FAM90A7PA6NKC0 464 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 FAM90A22PA8MWA6 464 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 FAM90A12PA8MX19 464 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 A8MXE2 369 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 DEFB108AA8MXU0 73 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 FAM90A23PA8MXZ1 464 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 KDM4EB2RXH2 506 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 GOLGA6L19H0YKK7 550 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CD5LO43866 347 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF354AO60765 605 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CTNSO60931 367 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 TRAPPC6AO75865 159 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 SOX30O94993 753 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 RCBTB2O95199 551 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 VAPBO95292 243 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 C1QAP02745 245 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 HPNP05981 417 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 SERPINA6P08185 405 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 HIST1H2AGP0C0S8 130 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 FAM157CP0CG43 387 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CDH1P12830 882 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 HIST1H2ADP20671 130 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 NMBRP28336 390 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PPP2R1BP30154 601 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 RPL22P35268 128 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PGM1P36871 562 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 HNF4AP41235 474 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 RPL21P46778 160 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 DIO3P55073 304 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ATP5J2P56134 94 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 TBPL1P62380 186 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 KCNJ2P63252 427 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CCZ1BP86790 482 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CCZ1P86791 482 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 RUNX1T1Q06455 604 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CRYZQ08257 329 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ASPHQ12797 758 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 RCN2Q14257 317 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CAPRIN1Q14444 709 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF791Q3KP31 576 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ANXA2RQ3ZCQ2 193 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 GLE1Q53GS7 698 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 RUNDC3AQ59EK9 446 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 NHSL2Q5HYW2 709 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 LUZP2Q86TE4 346 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF595Q8IYB9 648 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 DND1Q8IYX4 353 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF441Q8N8Z8 693 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 TC2NQ8N9U0 490 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 TRPV3Q8NET8 790 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 OR14A16Q8NHC5 309 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZPLD1Q8TCW7 415 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PAQR8Q8TEZ7 354 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 C2CD4CQ8TF44 421 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PTPMT1Q8WUK0 201 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PIK3IP1Q96FE7 263 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 SNF8Q96H20 258 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZFP3Q96NJ6 502 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 WFIKKN1Q96NZ8 548 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF347Q96SE7 839 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 REG4Q9BYZ8 158 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 TRIM31Q9BZY9 425 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 TRIM2Q9C040 744 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 OR8D2Q9GZM6 311 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 IL22Q9GZX6 179 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 KLHL31Q9H511 634 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CXorf56Q9H5V9 222 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PARVBQ9HBI1 364 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 PROK2Q9HC23 129 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 ARL8BQ9NVJ2 186 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 BFARQ9NZS9 450 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CAMK2AQ9UQM7 478 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 MRPS33Q9Y291 106 aaKnown RBP4.39□□□□□ -1.71
ATXN3-228ENST00000554592 DHRS7Q9Y394 339 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 CLDN16Q9Y5I7 305 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 IKBKGQ9Y6K9 419 aa4.39□□□□□ -1.71
ATXN3-228ENST00000554592 A8MV72 311 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 C17orf105B2RV13 164 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 GOLGA8KD6RF30 607 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 GOLGA8TH3BQL2 631 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 TRIM3O75382 744 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 ACSL3O95573 720 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 C8GP07360 202 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 APRTP07741 180 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 TPM1P09493 284 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 OGNP20774 298 aaKnown RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 CRYGSP22914 178 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 GDF1P27539 372 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SOX2P48431 317 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 CDK9P50750 372 aaKnown RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 RAB38P57729 211 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 STXBP1P61764 594 aaKnown RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 BTN3A2P78410 334 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 STX4Q12846 297 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms