RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 OR4C3Q8NH37 302 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SLC7A13Q8TCU3 470 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 DNAJA4Q8WW22 397 aaPredicted RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 PITX2Q99697 317 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SLC19A3Q9BZV2 496 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 GRIP2Q9C0E4 1043 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 LAT2Q9GZY6 243 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 SOX17Q9H6I2 414 aaPredicted RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 ASCL3Q9NQ33 180 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 FBXO34Q9NWN3 711 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 DNAJB12Q9NXW2 375 aaKnown RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 PISDQ9UG56 409 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 PTRH2Q9Y3E5 179 aaKnown RBP10.02□□□□□ -0.81
PABPN1-203ENST00000553960 OR10H1Q9Y4A9 318 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 AP4B1Q9Y6B7 739 aa10.02□□□□□ -0.81
PABPN1-203ENST00000553960 HEATR5AQ86XA9 2040 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 H3BNH8 94 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 hCG_2039718K7EN88 272 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 AP3D1O14617 1153 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 KLF4O43474 513 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 FZD7O75084 574 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 BCAS1O75363 584 aaPredicted RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 E2F6O75461 281 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 CYP7B1O75881 506 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 LYPD3O95274 346 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 SLC34A2O95436 690 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 ELAVL4P26378 380 aaKnown RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 MSX1P28360 303 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 IFNGR2P38484 337 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 CAPGP40121 348 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 RGS8P57771 180 aaPredicted RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 NHLH1Q02575 133 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 TARDBPQ13148 414 aaKnown RBP eCLIP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 SKP2Q13309 424 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 DNASE1L3Q13609 305 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 TAF11Q15544 211 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 GPR68Q15743 365 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 NTRK2Q16620 822 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 MFSD4BQ5TF39 518 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 WDR53Q7Z5U6 358 aaPredicted RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 PPP1R32Q7Z5V6 425 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 ZAR1Q86SH2 424 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 TSPYL5Q86VY4 417 aaPredicted RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 DHRSXQ8N5I4 330 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 ZNF321PQ8N8H1 164 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 OR4N2Q8NGD1 307 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 OR10Q1Q8NGQ4 319 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 CT55Q8WUE5 264 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 LIPHQ8WWY8 451 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 ACOT11Q8WXI4 607 aaPredicted RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 GATA6Q92908 595 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 HGDQ93099 445 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 HRASLS5Q96KN8 279 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 ALPK1Q96QP1 1244 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 ADI1Q9BV57 179 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 CPNE5Q9HCH3 593 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 NDRG4Q9ULP0 352 aaKnown RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 POFUT2Q9Y2G5 429 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 YARS2Q9Y2Z4 477 aaKnown RBP10.01□□□□□ -0.81
PABPN1-203ENST00000553960 NPFFR2Q9Y5X5 522 aa10.01□□□□□ -0.81
PABPN1-203ENST00000553960 A0A0B4J2E0 115 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 MYOCOSA0A1B0GUC4 107 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 A0A1B0GX12 115 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 SAC3D1A6NKF1 404 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 PDLIM1O00151 329 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 PEX12O00623 359 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 CHP2O43745 196 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 HS6ST1O60243 411 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 UGT2B11O75310 529 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 UTS2O95399 124 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 MT-ND1P03886 318 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 SERPINA7P05543 415 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 TCN2P20062 427 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 GSTM3P21266 225 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 KRT20P35900 424 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 DAPP51397 102 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 CTBP2P56545 445 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 CXCR4P61073 352 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 LRRC36Q1X8D7 754 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 ZNF791Q3KP31 576 aaPredicted RBP10□□□□□ -0.81
PABPN1-203ENST00000553960 ANKDD1AQ495B1 522 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 DCST1Q5T197 706 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 PDZK1Q5T2W1 519 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 CCNJQ5T5M9 372 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 FIGNL1Q6PIW4 674 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 MRGPREQ86SM8 312 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 RAB43Q86YS6 212 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 LACC1Q8IV20 430 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 POGLUT1Q8NBL1 392 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 SLC22A8Q8TCC7 542 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 ADAMTS16Q8TE57 1224 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 NKD1Q969G9 470 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 SLC38A4Q969I6 547 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 OMA1Q96E52 524 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 MCHR1Q99705 422 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 WFDC6Q9BQY6 131 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 FNDC11Q9BVV2 318 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 ADAM19Q9H013 955 aa10□□□□□ -0.81
PABPN1-203ENST00000553960 QRSL1Q9H0R6 528 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms