RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DNM1P46Q6ZS02 220 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 TRABD2AQ86V40 505 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 MISPQ8IVT2 679 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 ZNF619Q8N2I2 560 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 TMEM151AQ8N4L1 468 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 BANPQ8N9N5 519 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 RNF128Q8TEB7 428 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 PIK3R3Q92569 461 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 NEUROG1Q92886 237 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 KLHL15Q96M94 604 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 TMEM237Q96Q45 408 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 RHNO1Q9BSD3 238 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 POTEKPQ9BYX7 375 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 GP6Q9HCN6 339 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 MYNNQ9NPC7 610 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 EQTNQ9NQ60 294 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 MED17Q9NVC6 651 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 KLHL13Q9P2N7 655 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 ZNF180Q9UJW8 692 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 CDC42EP3Q9UKI2 254 aa12.63□□□□□ -0.39
CHMP1A-210ENST00000551981 SERTM1A2A2V5 107 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 OXSR1O95747 527 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 IGKV1D-16P01601 117 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 THBS1P07996 1170 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 PYGBP11216 843 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 PRPS2P11908 318 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 IMPDH1P20839 514 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 TSC22D1Q15714 1073 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 ZNF239Q16600 458 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 IMPG1Q17R60 797 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 PRSS53Q2L4Q9 553 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 GLE1Q53GS7 698 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 IKBIPQ70UQ0 350 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 LILRA2Q8N149 483 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 GATSQ8NAP1 163 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 FAM76AQ8TAV0 307 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 PIWIL2Q8TC59 973 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 ABHD3Q8WU67 409 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 SH3YL1Q96HL8 342 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 TRIM2Q9C040 744 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 GRIP2Q9C0E4 1043 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 IQCGQ9H095 443 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 TSPYL1Q9H0U9 437 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 TIMM22Q9Y584 194 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 CADP27708 2225 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
CHMP1A-210ENST00000551981 GJE1A6NN92 205 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 SCDO00767 359 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 SSX4O60224 188 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 PRKD3O94806 890 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 NKX2-2O95096 273 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 ADAP00813 363 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 ATP5F1P24539 256 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 ELK4P28324 431 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 LCN1P31025 176 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 GPC1P35052 558 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 SFTPDP35247 375 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 SLC7A5Q01650 507 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 HSPB3Q12988 150 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 ITGADQ13349 1161 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 PGGHGQ32M88 737 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 C6orf52Q5T4I8 152 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 NUFIP2Q7Z417 695 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 LCA5Q86VQ0 697 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 TDRPQ86YL5 185 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 SLC22A9Q8IVM8 553 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 TUSC5Q8IXB3 177 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 CDRT4Q8N9R6 151 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 OR4C3Q8NH37 302 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 CEP70Q8NHQ1 597 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 B4GALNT2Q8NHY0 566 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 ADAD1Q96M93 576 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 KCNA7Q96RP8 456 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 CDC42EP4Q9H3Q1 356 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 L2HGDHQ9H9P8 463 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 UBQLN4Q9NRR5 601 aa12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 CISD1Q9NZ45 108 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-210ENST00000551981 NDUFS7O75251 213 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 YES1P07947 543 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 SNRPAP09012 282 aaKnown RBP12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 NUDT6P53370 316 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 PRKAA2P54646 552 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 CDH11P55287 796 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 DSCR9P59020 149 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 AGAP6Q5VW22 663 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms