RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNF141Q15928 474 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 NDUFAF6Q330K2 333 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 JMJD6Q6NYC1 403 aaPredicted RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 OPN5Q6U736 354 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 COMTD1Q86VU5 262 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 TMEM156Q8N614 296 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 LRTOMTQ8WZ04 291 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 PMM1Q92871 262 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 SPACA9Q96E40 222 aaPredicted RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 CCNL2Q96S94 520 aaPredicted RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 PKP2Q99959 881 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 TBL1XR1Q9BZK7 514 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 LHPPQ9H008 270 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 UBQLN4Q9NRR5 601 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 ARMC1Q9NVT9 282 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 NKX1-2Q9UD57 310 aaPredicted RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 YARS2Q9Y2Z4 477 aaKnown RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 DTNAQ9Y4J8 743 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 SERINC4A6NH21 518 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 A6NL46 340 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 TMEM229AB2RXF0 380 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 NPIPB9F8W1W9 429 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 SYT5O00445 386 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 GNGT2O14610 69 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 EPPINO95925 133 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 CST1P01037 141 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 FBXO45P0C2W1 286 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 FASP25445 335 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 EVI2BP34910 448 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 YAP1P46937 504 aaKnown RBP12.98□□□□□ -0.33
CD4-208ENST00000538827 CCR4P51679 360 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 MEP1AQ16819 746 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 DEFB109BQ30KR1 87 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 RNF220Q5VTB9 566 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 LYPD8Q6UX82 237 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 IL20RBQ6UXL0 311 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 AMIGO2Q86SJ2 522 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 LACC1Q8IV20 430 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 BEST3Q8N1M1 668 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 PQLC1Q8N2U9 271 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 CLIP4Q8N3C7 705 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 TMEM102Q8N9M5 508 aaPredicted RBP12.98□□□□□ -0.33
CD4-208ENST00000538827 OR10G3Q8NGC4 313 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 OR4D11Q8NGI4 311 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 OR4C3Q8NH37 302 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 PHOSPHO1Q8TCT1 267 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 HGDQ93099 445 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 TMCO6Q96DC7 493 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 NODALQ96S42 347 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 ARHGDIGQ99819 225 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 DPH1Q9BZG8 443 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 SEMA6AQ9H2E6 1030 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 METTL7AQ9H8H3 244 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 RLIMQ9NVW2 624 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 KLRF1Q9NZS2 232 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 ABI3Q9P2A4 366 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 ABCG2Q9UNQ0 655 aa12.98□□□□□ -0.33
CD4-208ENST00000538827 PRAMEF25A6NGN4 478 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 H3BNH8 94 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 GTPBP1O00178 669 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 AP3D1O14617 1153 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 EFSO43281 561 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 GMFGO60234 142 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 LGI1O95970 557 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CSTAP01040 98 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 LDLRP01130 860 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 UBTFL6P0CB48 400 aaPredicted RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 UBL4AP11441 157 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 NAGAP17050 411 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 ITGA2P17301 1181 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 HOXB6P17509 224 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 TBXA2RP21731 343 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CASRP41180 1078 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CLK3P49761 638 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 HOXC5Q00444 222 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 SPIBQ01892 262 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 FOXD4Q12950 439 aaPredicted RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 CD226Q15762 336 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 NRF1Q16656 503 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 ACER2Q5QJU3 275 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 ABHD17BQ5VST6 288 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 PLEKHM3Q6ZWE6 761 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 MARCH3Q86UD3 253 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CYP4Z1Q86W10 505 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 RBM45Q8IUH3 476 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 GALNT16Q8N428 558 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 POGLUT1Q8NBL1 392 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 PAPD5Q8NDF8 572 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 ICA1LQ8NDH6 482 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CNOT9Q92600 299 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 RSPO3Q9BXY4 272 aaPredicted RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 AMBRA1Q9C0C7 1298 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CTPS2Q9NRF8 586 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 GPR83Q9NYM4 423 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms