RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	GDAP2	Q9NXN4	497 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PDP1	Q9P0J1	537 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NOCT	Q9UK39	431 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACAD8	Q9UKU7	415 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NPIPA1	Q9UND3	350 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	STUB1	Q9UNE7	303 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GPR132	Q9UNW8	380 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ERVW-1	Q9UQF0	538 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLK4	Q9Y5K2	254 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PCM1	Q15154	2024 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442		F8VVB4	439 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442		F8VWA3	439 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442		H0YIG0	161 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC22A2	O15244	555 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OGT	O15294	1046 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	INSIG1	O15503	277 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FAM189A1	O60320	539 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KERA	O60938	352 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TGM6	O95932	706 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	F10	P00742	488 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CD48	P09326	243 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FRMD6-AS1	P0C7T7	363 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IGHV4-31	P0DP07	118 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	VCL	P18206	1134 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HLA-DPA1	P20036	260 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	EFNA1	P20827	205 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACVR1B	P36896	505 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZFP36L2	P47974	494 aa	Known RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TKTL1	P51854	596 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GAS1	P54826	345 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FOXG1	P55316	489 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GCNT1	Q02742	428 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLC1	Q07866	573 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RPA4	Q13156	261 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SGCG	Q13326	291 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SGCB	Q16585	318 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PHKG1	Q16816	387 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HFE	Q30201	348 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC25A35	Q3KQZ1	300 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C10orf120	Q5SQS8	335 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KIAA1161	Q6NSJ0	714 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ISLR2	Q6UXK2	745 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PHLDB2	Q86SQ0	1253 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	AMIGO1	Q86WK6	493 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CNTN4	Q8IWV2	1026 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	AQP12A	Q8IXF9	295 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CDK20	Q8IZL9	346 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NDUFAF2	Q8N183	169 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF557	Q8N988	423 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442		Q8N9P0	234 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	POC1A	Q8NBT0	407 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DENND6B	Q8NEG7	585 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC24A4	Q8NFF2	622 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR13A1	Q8NGR1	328 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR52N5	Q8NH56	324 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR8D1	Q8WZ84	308 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	BCL2L2	Q92843	193 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TMA16	Q96EY4	203 aa	Known RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ST6GAL2	Q96JF0	529 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	AK8	Q96MA6	479 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KCNK16	Q96T55	309 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TRIM51	Q9BSJ1	452 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	URM1	Q9BTM9	101 aa	Known RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	POPDC2	Q9HBU9	364 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PNPLA3	Q9NST1	481 aa		3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FAF1	Q9UNN5	650 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HMCN2	Q8NDA2	5059 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442		A0A096LNT2	108 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IGLV9-49	A0A0B4J1Y8	123 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ILVBL	A1L0T0	632 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IGLON5	A6NGN9	336 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C17orf105	B2RV13	164 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC16A4	O15374	487 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TTI1	O43156	1089 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TSHB	P01222	138 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TNF	P01375	233 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NR3C1	P04150	777 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FGF1	P05230	155 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HMBS	P08397	361 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RBMY1C	P0DJD4	496 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DLAT	P10515	647 aa	Known RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CDH3	P22223	829 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DUT	P33316	252 aa	Known RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SERPINB6	P35237	376 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ATP6V1E1	P36543	226 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NPBWR1	P48145	328 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	STK19	P49842	368 aa	Predicted RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DVL1P1	P54792	670 aa	Predicted RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KIAA1024L	P59773	190 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SULT2A1	Q06520	285 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HERC3	Q15034	1050 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RPS6KA1	Q15418	735 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IZUMO4	Q1ZYL8	232 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	AARD	Q4LEZ3	155 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NFE4	Q86UQ8	179 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	VPS36	Q86VN1	386 aa		3.88	□□□□□ -1.79

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