RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ITCHQ96J02 903 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 UCK2Q9BZX2 261 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 RUBCNLQ9H714 662 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 STOML1Q9UBI4 398 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 Q9UFV3 132 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 MKLN1Q9UL63 735 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 VDAC3Q9Y277 283 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF337Q9Y3M9 751 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 NCOA6Q14686 2063 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-213ENST00000498495 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-213ENST00000498495 COL12A1Q99715 3063 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 A0A087WZY1 265 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 OR2M5A3KFT3 312 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 CD8B2A6NJW9 211 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 FAM90A27PA6NNH2 459 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 H3BML4 177 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 TOXO94900 526 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF708P17019 499 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 POU3F2P20265 443 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 MRPL19P49406 292 aaKnown RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF41P51814 821 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 CLDN18P56856 261 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 EEFSECP57772 596 aaKnown RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 TXNL4AP83876 142 aaKnown RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 CD226Q15762 336 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 TIGD2Q4W5G0 525 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 GPAT3Q53EU6 434 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 C6orf10Q5SRN2 563 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 SEM1Q6ZVN7 128 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 UBQLNLQ8IYU4 475 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 MEIOBQ8N635 442 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 TNIP2Q8NFZ5 429 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 VPS33AQ96AX1 596 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 ROPN1LQ96C74 230 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 TUBA1CQ9BQE3 449 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 CCDC167Q9P0B6 97 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 DCTN4Q9UJW0 460 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 CARD8Q9Y2G2 431 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 WDR45Q9Y484 360 aa11.58□□□□□ -0.56
HSPG2-213ENST00000498495 PHF3Q92576 2039 aaKnown RBP11.58□□□□□ -0.56
HSPG2-213ENST00000498495 NKX2-6A6NCS4 301 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 SERINC4A6NH21 518 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 CLCA1A8K7I4 914 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 KDM4EB2RXH2 506 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 HMGN4O00479 90 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF264O43296 627 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 HNRNPRO43390 633 aaKnown RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 UGT2B17O75795 530 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 NUDT14O95848 222 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 C1QCP02747 245 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 GUSBP08236 651 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZCCHC18P0CG32 403 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 NCF2P19878 526 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 CEACAM8P31997 349 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 RNF144AP50876 292 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 P2RX1P51575 399 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 HPCAP84074 193 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF117Q03924 483 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF141Q15928 474 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 PDZK1Q5T2W1 519 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 CBLN3Q6UW01 205 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 DNAJC14Q6Y2X3 702 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 OLIG3Q7RTU3 272 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 LIX1LQ8IVB5 337 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 FUNDC1Q8IVP5 155 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 RFWD2Q8NHY2 731 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZFP90Q8TF47 636 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZBTB8AQ96BR9 441 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 SIKE1Q9BRV8 207 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF350Q9GZX5 532 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 RABEP2Q9H5N1 569 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 TPT1P8Q9HAU6 139 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 NPHS2Q9NP85 383 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 MED4Q9NPJ6 270 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 POLE3Q9NRF9 147 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 TMEM45AQ9NWC5 275 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 TRIM33Q9UPN9 1127 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 LIPT1Q9Y234 373 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 AP4B1Q9Y6B7 739 aa11.57□□□□□ -0.56
HSPG2-213ENST00000498495 A0A0G2JND7 137 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 MBD3L4A6NDZ8 208 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 MBD3L3A6NE82 208 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 MBD3L5A6NJ08 208 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 CYSRT1A8MQ03 144 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SHISA8B8ZZ34 492 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 C19orf84I3L1E1 186 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 DVL2O14641 736 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SEC14L5O43304 696 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 EIF4E2O60573 245 aaKnown RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 CYP7B1O75881 506 aa11.56□□□□□ -0.56
HSPG2-213ENST00000498495 SNRPB2P08579 225 aaKnown RBP11.56□□□□□ -0.56
HSPG2-213ENST00000498495 COX6B1P14854 86 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms