RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 C12orf66Q96MD2 445 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 YPEL4Q96NS1 127 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 GGACTQ9BVM4 153 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ARL6Q9H0F7 186 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PRDM13Q9H4Q3 707 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PDFQ9HBH1 243 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PRMT8Q9NR22 394 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 MAN2C1Q9NTJ4 1040 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CUTCQ9NTM9 273 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PCDHB10Q9UN67 800 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TNFSF18Q9UNG2 199 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ACOD1A6NK06 481 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 FAM157AC9JC47 383 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 AP4M1O00189 453 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 YY2O15391 372 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ICOSLGO75144 302 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 NDUFS3O75489 264 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 IFNW1P05000 195 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 COX5BP10606 129 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HIST1H1BP16401 226 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TACR1P25103 407 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 MTNR1AP48039 350 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SRP9P49458 86 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TAF6P49848 677 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CCR8P51685 355 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 PNLIPRP2P54317 469 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 EPHB3P54753 998 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 DGCR2P98153 550 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HMGCS1Q01581 520 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ACY1Q03154 408 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SSBP1Q04837 148 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CHAF1BQ13112 559 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ARHGEF7Q14155 803 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SSPNQ14714 243 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 LRRN1Q6UXK5 716 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 OVCH1Q7RTY7 1134 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 OR2W3Q7Z3T1 314 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 C6orf120Q7Z4R8 191 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SIDT2Q8NBJ9 832 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HJURPQ8NCD3 748 aaPredicted RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 DNAAF1Q8NEP3 725 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 GPRC5AQ8NFJ5 357 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TRMT10AQ8TBZ6 339 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SPPL2AQ8TCT8 520 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 RPS4Y2Q8TD47 263 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 RFKQ969G6 155 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HIST1H2BAQ96A08 127 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TIMP4Q99727 224 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 DPH2Q9BQC3 489 aaPredicted RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 C19orf12Q9NSK7 152 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 RCC2Q9P258 522 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 RUVBL1Q9Y265 456 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 PIAS3Q9Y6X2 628 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CHURC1-FNTBB4DL54 471 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 EMC8O43402 210 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 BEST1O76090 585 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 OAZ2O95190 189 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 FGBP02675 491 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HOXB5P09067 269 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 OR12D1P0DN82 309 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 EPXP11678 715 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HOXA5P20719 270 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 LMO2P25791 158 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 HTR1FP30939 366 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 GDNFP39905 211 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 GIPRP48546 466 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 H2BFSP57053 126 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 RAC1P63000 192 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SIM1P81133 766 aaPredicted RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 GAB1Q13480 694 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SCARB2Q14108 478 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ATP13A5Q4VNC0 1218 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 VWA2Q5GFL6 755 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 MARC1Q5VT66 337 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ADNP2Q6IQ32 1131 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CERS6Q6ZMG9 384 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 NAA40Q86UY6 237 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TCEANCQ8N8B7 351 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SLC30A7Q8NEW0 376 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 GTPBP3Q969Y2 492 aaKnown RBP4.48□□□□□ -1.69
PRKD3-210ENST00000494667 IL4I1Q96RQ9 567 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 MGME1Q9BQP7 344 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CERS4Q9HA82 394 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 DUSP22Q9NRW4 184 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ANGPT4Q9Y264 503 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TIMM10BQ9Y5J6 103 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TRBV4-1A0A0J9YWV2 114 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 GSAPA4D1B5 854 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TTLL8A6PVC2 850 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CLDN4O14493 209 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 TBX19O60806 448 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 NCR1O76036 304 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 AKR7A3O95154 331 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 SIX6O95475 246 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 ADH1CP00326 375 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 C1QCP02747 245 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 AKAP5P24588 427 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 CERS1P27544 350 aa4.48□□□□□ -1.69
PRKD3-210ENST00000494667 LIM2P55344 173 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms