RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 HOXC5Q00444 222 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 FGD3Q5JSP0 725 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 IGF2-ASQ6U949 168 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 C16orf47Q6ZP98 133 aaPredicted RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 TSPYL5Q86VY4 417 aaPredicted RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 SLC35B4Q969S0 331 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 ALPK1Q96QP1 1244 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 OSBPL11Q9BXB4 747 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 ZNF160Q9HCG1 818 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 CTPS2Q9NRF8 586 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 TESQ9UGI8 421 aaKnown RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 SLC35A3Q9Y2D2 325 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 NPFFR2Q9Y5X5 522 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 CPSF4LA6NMK7 179 aaKnown RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 PPM1BO75688 479 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 NADKO95544 446 aaPredicted RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 GKN3PP0CG01 181 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 PRG2P13727 222 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 MICAQ29983 383 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 ENTPD8Q5MY95 495 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 OR10G2Q8NGC3 310 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 NKD1Q969G9 470 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 PRR14Q9BWN1 585 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 POLR2J2Q9GZM3 115 aaKnown RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 POLR2J3Q9H1A7 115 aaKnown RBP19.91■□□□□ 0.78
SMC4-221ENST00000489573 Q9H521 79 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 ASCL3Q9NQ33 180 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 KIF17Q9P2E2 1029 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 MYOTQ9UBF9 498 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 TMCC3Q9ULS5 477 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 PCDHGA6Q9Y5G7 932 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 AP4B1Q9Y6B7 739 aa19.91■□□□□ 0.78
SMC4-221ENST00000489573 A0A1W2PRQ8 180 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 OR6C70A6NIJ9 312 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 FMO6PO60774 539 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 CCNB2O95067 398 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 OR5F1O95221 314 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 HPP00738 406 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 CSTAP01040 98 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 NGFRP08138 427 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 CELA2AP08217 269 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 THRBP10828 461 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 ELAVL4P26378 380 aaKnown RBP19.9■□□□□ 0.78
SMC4-221ENST00000489573 ADH7P40394 386 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 DGCR6Q14129 220 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 WLSQ5T9L3 541 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 FNDC7Q5VTL7 733 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 ANKRD34AQ69YU3 496 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 FAHD1Q6P587 224 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 IL22RA1Q8N6P7 574 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 SLC22A8Q8TCC7 542 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 NAF1Q96HR8 494 aaKnown RBP19.9■□□□□ 0.78
SMC4-221ENST00000489573 RDH12Q96NR8 316 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 FBXL4Q9UKA2 621 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 LRCH1Q9Y2L9 728 aa19.9■□□□□ 0.78
SMC4-221ENST00000489573 PTPRBP23467 1997 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 TRBV4-1A0A0J9YWV2 114 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 ARRDC5A6NEK1 342 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 FAAHO00519 579 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 UGT2B11O75310 529 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 IGFBP5P24593 272 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 FOXD4Q12950 439 aaPredicted RBP19.89■□□□□ 0.77
SMC4-221ENST00000489573 IL10RAQ13651 578 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 EFR3AQ14156 821 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 NHSL2Q5HYW2 709 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 DCST1Q5T197 706 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 C6orf52Q5T4I8 152 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 DESI1Q6ICB0 168 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 ZNF550Q7Z398 422 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 DTX1Q86Y01 620 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 RAB43Q86YS6 212 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 ATG16L2Q8NAA4 619 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 PSD2Q9BQI7 771 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 ZBTB20Q9HC78 741 aaPredicted RBP19.89■□□□□ 0.77
SMC4-221ENST00000489573 MAN2C1Q9NTJ4 1040 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 NTNG1Q9Y2I2 539 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 ORC6Q9Y5N6 252 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 NINQ8N4C6 2090 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 GVINP1Q7Z2Y8 2422 aa19.89■□□□□ 0.77
SMC4-221ENST00000489573 H3BNH8 94 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ZNF354AO60765 605 aaPredicted RBP19.88■□□□□ 0.77
SMC4-221ENST00000489573 SNAP29O95721 258 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 UBTFL6P0CB48 400 aaPredicted RBP19.88■□□□□ 0.77
SMC4-221ENST00000489573 NAGAP17050 411 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 HTR2AP28223 471 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 DAPP51397 102 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ST3GAL3Q11203 375 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 RFX4Q33E94 735 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 KDM4DQ6B0I6 523 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 MRGPREQ86SM8 312 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ZNF440Q8IYI8 595 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 FAM71CQ8NEG0 241 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ADAMTS16Q8TE57 1224 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ZNF559Q9BR84 538 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 FUZQ9BT04 418 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ADI1Q9BV57 179 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 ANKRD19PQ9H560 264 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 P4HTMQ9NXG6 502 aa19.88■□□□□ 0.77
SMC4-221ENST00000489573 TMEFF2Q9UIK5 374 aaPredicted RBP19.88■□□□□ 0.77
SMC4-221ENST00000489573 MRPS18BQ9Y676 258 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms