RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 LHPPQ9H008 270 aa11.56□□□□□ -0.56
SIK3-209ENST00000480222 LIN28AQ9H9Z2 209 aaKnown RBP11.56□□□□□ -0.56
SIK3-209ENST00000480222 C8orf4Q9NR00 106 aa11.56□□□□□ -0.56
SIK3-209ENST00000480222 DNAJB12Q9NXW2 375 aaKnown RBP11.56□□□□□ -0.56
SIK3-209ENST00000480222 ABI3Q9P2A4 366 aa11.56□□□□□ -0.56
SIK3-209ENST00000480222 ACAD8Q9UKU7 415 aa11.56□□□□□ -0.56
SIK3-209ENST00000480222 POLHQ9Y253 713 aa11.56□□□□□ -0.56
SIK3-209ENST00000480222 CACNA1GO43497 2377 aa11.56□□□□□ -0.56
SIK3-209ENST00000480222 CPAMD8Q8IZJ3 1885 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 PRAMEF25A6NGN4 478 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 GNGT2O14610 69 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 AP3D1O14617 1153 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 ZNF354AO60765 605 aaPredicted RBP11.55□□□□□ -0.56
SIK3-209ENST00000480222 CSTAP01040 98 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 UQCRBP14927 111 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 ITGA3P26006 1051 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 GCKP35557 465 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 SOX3P41225 446 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 SOX8P57073 446 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 FBXW4P57775 412 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 ZNF791Q3KP31 576 aaPredicted RBP11.55□□□□□ -0.56
SIK3-209ENST00000480222 HMBOX1Q6NT76 420 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 DEF8Q6ZN54 512 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 C16orf47Q6ZP98 133 aaPredicted RBP11.55□□□□□ -0.56
SIK3-209ENST00000480222 ZNF605Q86T29 641 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 OFCC1Q8IZS5 231 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 CLIP4Q8N3C7 705 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 SVOPLQ8N434 492 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 TOR1AIP2Q8NFQ8 470 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 BRIX1Q8TDN6 353 aaKnown RBP11.55□□□□□ -0.56
SIK3-209ENST00000480222 PHF10Q8WUB8 498 aaKnown RBP11.55□□□□□ -0.56
SIK3-209ENST00000480222 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 THOC3Q96J01 351 aaKnown RBP11.55□□□□□ -0.56
SIK3-209ENST00000480222 VCXQ9H320 206 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 CDCP1Q9H5V8 836 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 REEP1Q9H902 201 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 PRDM4Q9UKN5 801 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 ZZEF1O43149 2961 aa11.55□□□□□ -0.56
SIK3-209ENST00000480222 IGF2RP11717 2491 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 CLDN24A6NM45 220 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 ZNF264O43296 627 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 NDUFB5O43674 189 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 FADS1O60427 444 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 E2F6O75461 281 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 CAPNS1P04632 268 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 THRBP10828 461 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 CASRP41180 1078 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 PTDSS1P48651 473 aaKnown RBP11.54□□□□□ -0.56
SIK3-209ENST00000480222 ZNF136P52737 540 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 SMIM11AP58511 58 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 SPIBQ01892 262 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 PLAURQ03405 335 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 SKP2Q13309 424 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 SNTA1Q13424 505 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 NPTX1Q15818 432 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 ACER2Q5QJU3 275 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 OGFRL1Q5TC84 451 aaPredicted RBP11.54□□□□□ -0.56
SIK3-209ENST00000480222 TSEN54Q7Z6J9 526 aaKnown RBP11.54□□□□□ -0.56
SIK3-209ENST00000480222 AMIGO2Q86SJ2 522 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 LACC1Q8IV20 430 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 TMEM156Q8N614 296 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 AMER2Q8N7J2 671 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 OR4D11Q8NGI4 311 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 PSMF1Q92530 271 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 EME1Q96AY2 570 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 NRBF2Q96F24 287 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 SGCZQ96LD1 299 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 DHRS1Q96LJ7 313 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 CCNL2Q96S94 520 aaPredicted RBP11.54□□□□□ -0.56
SIK3-209ENST00000480222 EPYCQ99645 322 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 ZNF559Q9BR84 538 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 C9orf16Q9BUW7 83 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 OSBPL10Q9BXB5 764 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 ANKRD19PQ9H560 264 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 ZBTB20Q9HC78 741 aaPredicted RBP11.54□□□□□ -0.56
SIK3-209ENST00000480222 RLIMQ9NVW2 624 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 HPF1Q9NWY4 346 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 FLRT3Q9NZU0 649 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 FAM208BQ5VWN6 2430 aa11.54□□□□□ -0.56
SIK3-209ENST00000480222 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 ARGFXA6NJG6 315 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 FAAHO00519 579 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 KLK10O43240 276 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 TLX3O43711 291 aaPredicted RBP11.53□□□□□ -0.56
SIK3-209ENST00000480222 PEX1O43933 1283 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 EIF4E2O60573 245 aaKnown RBP11.53□□□□□ -0.56
SIK3-209ENST00000480222 OR6B1O95007 311 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 OR5F1O95221 314 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 UBTFL6P0CB48 400 aaPredicted RBP11.53□□□□□ -0.56
SIK3-209ENST00000480222 PRKAR1AP10644 381 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 ZNF23P17027 643 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 FPR1P21462 350 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 PEX2P28328 305 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 RRM2P31350 389 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 DNAJA1P31689 397 aaKnown RBP11.53□□□□□ -0.56
SIK3-209ENST00000480222 VHLP40337 213 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 SLC6A8P48029 635 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 ARHGDIAP52565 204 aa11.53□□□□□ -0.56
SIK3-209ENST00000480222 SUMO3P55854 103 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms