RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 UCKL1Q9NWZ5 548 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 CITO14578 2027 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 OR6C70A6NIJ9 312 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 SLC33A1O00400 549 aaPredicted RBP12.03□□□□□ -0.48
NUP58-206ENST00000463407 ZNF749O43361 778 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 SORBS2O94875 1100 aaKnown RBP12.03□□□□□ -0.48
NUP58-206ENST00000463407 SLITRK5O94991 958 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 LCKP06239 509 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 TMBIM6P55061 237 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 HOXC5Q00444 222 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 RAB11FIP2Q7L804 512 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 RCBTB1Q8NDN9 531 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 HSPE1-MOB4S4R3N1 261 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 HTR3BO95264 441 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 SLC2A5P22732 501 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 CNR2P34972 360 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 MTNR1AP48039 350 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 GPR19Q15760 415 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 WBP2NLQ6ICG8 309 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 VRK2Q86Y07 508 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 FAM46BQ96A09 425 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 RFT1Q96AA3 541 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 MUCL1Q96DR8 90 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 FAM71F1Q96KD3 344 aaPredicted RBP12.03□□□□□ -0.48
NUP58-206ENST00000463407 ATOH8Q96SQ7 321 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 KATNBL1Q9H079 304 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 INIPQ9NRY2 104 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 SMOXQ9NWM0 555 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 IL37Q9NZH6 218 aa12.03□□□□□ -0.48
NUP58-206ENST00000463407 G3V3Y1 287 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 RETP07949 1114 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 SOX3P41225 446 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 C6orf15Q6UXA7 325 aaPredicted RBP12.02□□□□□ -0.48
NUP58-206ENST00000463407 DTWD1Q8N5C7 304 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 DTX3Q8N9I9 347 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 CHRDQ9H2X0 955 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 SPHK1Q9NYA1 384 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 PLEK2Q9NYT0 353 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 TMEM181Q9P2C4 612 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 LAMA4Q16363 1823 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 A0A1W2PPW3 197 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 PLSCR5A0PG75 271 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 CASC3O15234 703 aaKnown RBP12.02□□□□□ -0.48
NUP58-206ENST00000463407 PRKXP51817 358 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 GABARAPL2P60520 117 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 NKX3-2P78367 333 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 SPHARQ15513 63 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 MOGQ16653 247 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 CDNFQ49AH0 187 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 OGFRL1Q5TC84 451 aaPredicted RBP12.02□□□□□ -0.48
NUP58-206ENST00000463407 ZNF420Q8TAQ5 688 aaPredicted RBP12.02□□□□□ -0.48
NUP58-206ENST00000463407 C3orf30Q96M34 536 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 TUBA1CQ9BQE3 449 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 MOV10Q9HCE1 1003 aaKnown RBP12.02□□□□□ -0.48
NUP58-206ENST00000463407 ATP13A2Q9NQ11 1180 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 FBXL3Q9UKT7 428 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 PAPPA2Q9BXP8 1791 aa12.02□□□□□ -0.48
NUP58-206ENST00000463407 H0Y8X5 98 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 MBTPS1Q14703 1052 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 SMAD2Q15796 467 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 SERPINA11Q86U17 422 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 MEX3DQ86XN8 651 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 MMP21Q8N119 569 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 METTL25Q8N6Q8 603 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 SDR9C7Q8NEX9 313 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 NPRL2Q8WTW4 380 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 SLC25A44Q96H78 314 aaPredicted RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 CDC6Q99741 560 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 LMF2Q9BU23 707 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 MRPL33O75394 65 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 CNOT4O95628 575 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 IMPA1P29218 277 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 TSSK4Q6SA08 328 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.02□□□□□ -0.49
NUP58-206ENST00000463407 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 MGLLQ99685 303 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 DNAJB11Q9UBS4 358 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 KCNIP3Q9Y2W7 256 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 S100A9P06702 114 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 SLC26A5P58743 744 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 PSMA6P60900 246 aaKnown RBP12.02□□□□□ -0.49
NUP58-206ENST00000463407 PLGLAQ15195 96 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 RAB11BQ15907 218 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 KCTD11Q693B1 232 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 SYNPOQ8N3V7 929 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 MFSD8Q8NHS3 518 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 NUDT15Q9NV35 164 aa12.02□□□□□ -0.49
NUP58-206ENST00000463407 TRAV6A0A075B6T7 132 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 PRRT4C9JH25 899 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 DIRAS3O95661 229 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 GCAP28676 217 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 ERVK-25P63136 954 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 RUNDC3AQ59EK9 446 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 C3P1Q6ZMU1 363 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 LANCL3Q6ZV70 420 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 CYB561A3Q8NBI2 242 aa12.01□□□□□ -0.49
NUP58-206ENST00000463407 CLMPQ9H6B4 373 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms