RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LRRC42Q9Y546 428 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 PCDHGA6Q9Y5G7 932 aa6.12□□□□□ -1.43
VPS41-204ENST00000413141 CCDC88CQ9P219 2028 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 TRBV4-1A0A0J9YWV2 114 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 A0A1W2PQD3 144 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 A0A1W2PRQ8 180 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 C7orf72A4D263 438 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ARRDC5A6NEK1 342 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 SERINC4A6NH21 518 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 OR6C70A6NIJ9 312 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 CPSF4LA6NMK7 179 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 WWP2O00308 870 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 SCDO00767 359 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 AP3D1O14617 1153 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 HS6ST1O60243 411 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ZNF354AO60765 605 aaPredicted RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 FMO6PO60774 539 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 UGT2B11O75310 529 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 REM1O75628 298 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 PPM1BO75688 479 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ZFAND5O76080 213 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 DXOO77932 396 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 CCNB2O95067 398 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 OR5F1O95221 314 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 HPP00738 406 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 H1F0P07305 194 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 NGFRP08138 427 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 UBTFL6P0CB48 400 aaPredicted RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 GKN3PP0CG01 181 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 UBL4AP11441 157 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 PRG2P13727 222 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 TBXA2RP21731 343 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 HTR2AP28223 471 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 EVI2BP34910 448 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ADH7P40394 386 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 HMGA2P52926 109 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 PNLIPRP2P54317 469 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 TAS2R41P59536 307 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 DGCR6Q14129 220 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 CD226Q15762 336 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 NDUFAF6Q330K2 333 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 KLHL26Q53HC5 615 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 FGD3Q5JSP0 725 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ENTPD8Q5MY95 495 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ANKRD34AQ69YU3 496 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 DESI1Q6ICB0 168 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 FAHD1Q6P587 224 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 C16orf47Q6ZP98 133 aaPredicted RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 PLEKHM3Q6ZWE6 761 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 DTX1Q86Y01 620 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 RAB43Q86YS6 212 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 TAGAPQ8N103 731 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 FAM71CQ8NEG0 241 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 OR10G2Q8NGC3 310 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 SLC22A8Q8TCC7 542 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ADAMTS17Q8TE56 1095 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ADAMTS16Q8TE57 1224 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 THAP3Q8WTV1 239 aaPredicted RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 NR4A3Q92570 626 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 CNOT9Q92600 299 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 NKD1Q969G9 470 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 SLC35B4Q969S0 331 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 NACC2Q96BF6 587 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ZNF570Q96NI8 536 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 RDH12Q96NR8 316 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 MCHR1Q99705 422 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 FUZQ9BT04 418 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 FNDC11Q9BVV2 318 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 OSBPL10Q9BXB5 764 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 DEFB126Q9BYW3 111 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 POLR2J2Q9GZM3 115 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 POLR2J3Q9H1A7 115 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 NMNAT1Q9HAN9 279 aaPredicted RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 SMURF2Q9HAU4 748 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 CTPS2Q9NRF8 586 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 P4HTMQ9NXG6 502 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 KIF17Q9P2E2 1029 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 MYOTQ9UBF9 498 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 TMEFF2Q9UIK5 374 aaPredicted RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 RAB26Q9ULW5 256 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 SLC35A3Q9Y2D2 325 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 NTNG1Q9Y2I2 539 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 LRCH1Q9Y2L9 728 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 NPFFR2Q9Y5X5 522 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 MRPS18BQ9Y676 258 aaKnown RBP6.11□□□□□ -1.43
VPS41-204ENST00000413141 AP4B1Q9Y6B7 739 aa6.11□□□□□ -1.43
VPS41-204ENST00000413141 ALG1L2C9J202 215 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 FAAHO00519 579 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ADAM10O14672 748 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ADAM11O75078 769 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 OR2J2O76002 312 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SNAP29O95721 258 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 CSTAP01040 98 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 THY1P04216 161 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 FBXO45P0C2W1 286 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 THRBP10828 461 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 LIPCP11150 499 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 UQCRBP14927 111 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 HPGDP15428 266 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 NAGAP17050 411 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms