RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 GPR157Q5UAW9 335 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 SYPL2Q5VXT5 272 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 ZDHHC20Q5W0Z9 365 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 MRM1Q6IN84 353 aaKnown RBP5.4□□□□□ -1.54
RFC1-202ENST00000381897 SSX9Q7RTT3 188 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 ZNF546Q86UE3 836 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 TAC4Q86UU9 113 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 SIDT2Q8NBJ9 832 aaKnown RBP5.4□□□□□ -1.54
RFC1-202ENST00000381897 C7orf57Q8NEG2 295 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 ZNF671Q8TAW3 534 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.4□□□□□ -1.541e-14■■■■■ 56.1
RFC1-202ENST00000381897 C5orf30Q96GV9 206 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 ZFP42Q96MM3 310 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 NECAB3Q96P71 396 aaPredicted RBP5.4□□□□□ -1.54
RFC1-202ENST00000381897 CCM2Q9BSQ5 444 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 MENTQ9BUN1 341 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 FBXO44Q9H4M3 255 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 SPG21Q9NZD8 308 aa5.4□□□□□ -1.54
RFC1-202ENST00000381897 SERTM2A0A1B0GWG4 89 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 OR6C65A6NJZ3 312 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 A6NNC1 897 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 LEUTXA8MZ59 168 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CBX4O00257 560 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CDC7O00311 574 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 KHDRBS3O75525 346 aaKnown RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 TSPAN12O95859 305 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CD33P20138 364 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 COL9A1P20849 921 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 GSTM3P21266 225 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CD6P30203 668 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CLCN4P51793 760 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 YBEYP58557 167 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 ZNF33BQ06732 778 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 RBBP4Q09028 425 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 C2orf80Q0P641 193 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 DBPQ10586 325 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 BTN1A1Q13410 526 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 AANATQ16613 207 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 SYTL3Q4VX76 610 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MPPE1Q53F39 396 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MORN1Q5T089 497 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 PSRC1Q6PGN9 363 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 GLB1LQ6UWU2 654 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 PAMR1Q6UXH9 720 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 TECPR1Q7Z6L1 1165 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MRPL55Q7Z7F7 128 aaKnown RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 ANKRD46Q86W74 232 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MARCH9Q86YJ5 346 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 HJURPQ8NCD3 748 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 B3GNT7Q8NFL0 401 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 OR8J1Q8NGP2 316 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 OR14C36Q8NHC7 312 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 HMGCLL1Q8TB92 370 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 IMP4Q96G21 291 aaKnown RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 ATOH8Q96SQ7 321 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 GPR20Q99678 358 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 PRRX2Q99811 253 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MCMBPQ9BTE3 642 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 TSSK6Q9BXA6 273 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 RTN4RQ9BZR6 473 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 SRRQ9GZT4 340 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 OR51B5Q9H339 312 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 OR51J1Q9H342 316 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 ABHD16BQ9H3Z7 469 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MTCH1Q9NZJ7 389 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 VSX1Q9NZR4 365 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 COMMD9Q9P000 198 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 FZD4Q9ULV1 537 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MRPS33Q9Y291 106 aaKnown RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 PRSS44E7EML9 344 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CDK2AP1O14519 115 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MID1O15344 667 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 TRAPPC6AO75865 159 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 H2AFB2P0C5Z0 115 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 C21orf33P30042 268 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 OR1E1P30953 314 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 ACAA2P42765 397 aaKnown RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 CBX5P45973 191 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 SUCLG1P53597 346 aaKnown RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 PNLIPRP1P54315 467 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CLDN20P56880 219 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MAXP61244 160 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 HHEXQ03014 270 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 MALLQ13021 153 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 ZNF266Q14584 549 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 IL13RA2Q14627 380 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 TRAM1Q15629 374 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 BAK1Q16611 211 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CPSF6Q16630 551 aaKnown RBP eCLIP5.4□□□□□ -1.55
RFC1-202ENST00000381897 MICAQ29983 383 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 IDNKQ5T6J7 187 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CD276Q5ZPR3 534 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 VASNQ6EMK4 673 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 LIN54Q6MZP7 749 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CNIH2Q6PI25 160 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 HAGHLQ6PII5 290 aaPredicted RBP5.4□□□□□ -1.55
RFC1-202ENST00000381897 DLEU7Q6UYE1 221 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 C1orf122Q6ZSJ8 110 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 CBLL1Q75N03 491 aa5.4□□□□□ -1.55
RFC1-202ENST00000381897 ADGRG3Q86Y34 549 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms