RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 A8MVJ9 347 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 HNRNPCL2B2RXH8 293 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 C9J4A7 227 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 SUV39H1O43463 412 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 NME6O75414 186 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 KLF7O75840 302 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 MFN2O95140 757 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 NADKO95544 446 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 APOA1P02647 267 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 CHRM4P08173 479 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 PCMT1P22061 227 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 AQP1P29972 269 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 DDOSTP39656 456 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 MAGEA2P43356 314 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 GPR143P51810 404 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 PGDP52209 483 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 EMP2P54851 167 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 SLC37A1P57057 533 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 PSG6Q00889 435 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 PRKCDQ05655 676 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 CHRNB3Q05901 458 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 NCF4Q15080 339 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 CDK10Q15131 360 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 TMEM164Q5U3C3 297 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 MLIPQ5VWP3 458 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 FAM199XQ6PEV8 388 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 SHISA6Q6ZSJ9 500 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 LANCL3Q6ZV70 420 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 WDR53Q7Z5U6 358 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 GALNT10Q86SR1 603 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 C16orf52Q8NHV5 167 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 SLC2A12Q8TD20 617 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 SLC9A6Q92581 669 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 YIPF6Q96EC8 236 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 SLC47A1Q96FL8 570 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 MUS81Q96NY9 551 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 NODALQ96S42 347 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 DOHHQ9BU89 302 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 TRAF4Q9BUZ4 470 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 CHID1Q9BWS9 393 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 DSN1Q9H410 356 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 PRODH2Q9UF12 536 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 GPN3Q9UHW5 284 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 C3orf18Q9UK00 162 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 RBMX2Q9Y388 322 aaKnown RBP11.81□□□□□ -0.52
DDX39A-202ENST00000324340 CLCA3PQ9Y6N3 262 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 LOC102723996A0A087X1L8 192 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 TEX51A0A1B0GUA7 166 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 CLDN24A6NM45 220 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SLC30A4O14863 429 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 PCDH17O14917 1159 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SNAP29O95721 258 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF682O95780 498 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ALPLP05186 524 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 PRKCAP17252 672 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 FOXL2P58012 376 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 KCNJ10P78508 379 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF155Q12901 538 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 TARDBPQ13148 414 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ZNHIT3Q15649 155 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 RPS26P11Q5JNZ5 115 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 C3orf38Q5JPI3 329 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SYT6Q5T7P8 510 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 XKRXQ6PP77 449 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 C6orf15Q6UXA7 325 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 C16orf62Q7Z3J2 963 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SLC44A2Q8IWA5 706 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 OR1N1Q8NGS0 311 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SETD6Q8TBK2 473 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 MAGEE2Q8TD90 523 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 METTL21AQ8WXB1 218 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 PMM1Q92871 262 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SDCCAG3Q96C92 435 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 HSH2DQ96JZ2 352 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SLC46A1Q96NT5 459 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF300Q96RE9 604 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF607Q96SK3 696 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SDF2Q99470 211 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 CRB3Q9BUF7 120 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF350Q9GZX5 532 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SAP130Q9H0E3 1048 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 SLC38A1Q9H2H9 487 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 POLE3Q9NRF9 147 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 STMN3Q9NZ72 180 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 OSGIN1Q9UJX0 560 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 PADI1Q9ULC6 663 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 CFL2Q9Y281 166 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 DTX4Q9Y2E6 619 aa11.8□□□□□ -0.52
DDX39A-202ENST00000324340 PNMA8CA0A1B0GUJ8 204 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 A8MUA0 341 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 B8ZZF3 427 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 BRINP1O60477 761 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ZIC2O95409 532 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 OPN1SWP03999 348 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms