RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CD97P48960 835 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ARG2P78540 354 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 VLDLRP98155 873 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 RHDQ02161 417 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TUBA3CQ13748 450 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 LIN52Q52LA3 116 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TUBA3EQ6PEY2 450 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ISLR2Q6UXK2 745 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 CATSPER1Q8NEC5 780 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 APOBEC4Q8WW27 367 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 HGDQ93099 445 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 UTP23Q9BRU9 249 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.11□□□□□ -0.153e-8■■■□□ 14.8
PDLIM5-202ENST00000318007 ANAPC2Q9UJX6 822 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 DTNAQ9Y4J8 743 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TCRBV3S1A0A5B6 114 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 SERINC4A6NH21 518 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 AQP12BA6NM10 295 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 NPIPB9F8W1W9 429 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 HCRTR2O43614 444 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 ADAM11O75078 769 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 SOX30O94993 753 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 NUDT14O95848 222 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 TBXA2RP21731 343 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 RPS4Y1P22090 263 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 EEF1A1P68104 462 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 GANABQ14697 944 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 OR1C1Q15619 314 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 KLHL26Q53HC5 615 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 PRAMEF8Q5VWM4 474 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 PRAMEF7Q5VXH5 474 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 ERMP1Q7Z2K6 904 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF227Q86WZ6 799 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 CARM1Q86X55 608 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 AQP12AQ8IXF9 295 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 OR6T1Q8NGN1 323 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 DUSP19Q8WTR2 217 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 POLE3Q9NRF9 147 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 ABI3Q9P2A4 366 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 ABCG2Q9UNQ0 655 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 IFT52Q9Y366 437 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF451Q9Y4E5 1061 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 PCDHGA10Q9Y5H3 936 aa14.1□□□□□ -0.15
PDLIM5-202ENST00000318007 K7EM74 188 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 GNB5O14775 395 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 FUT4P22083 530 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CASRP41180 1078 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CASP3P42574 277 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 DNASE1L1P49184 302 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 RGS8P57771 180 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 EFR3AQ14156 821 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 FGFBP1Q14512 234 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 FAM98BQ52LJ0 330 aaKnown RBP14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CRTC2Q53ET0 693 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 PSD4Q8NDX1 1056 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 RNF217Q8TC41 542 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 BAG5Q9UL15 447 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CPAMD8Q8IZJ3 1885 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CDHR4A6H8M9 788 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 B4DXG7 233 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 TP53I11O14683 189 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 FADS1O60427 444 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CDC40O60508 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 SLC25A12O75746 678 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 BAG2O95816 211 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 C8BP07358 591 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 UBL4AP11441 157 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 PRKAR1BP31321 381 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 SESN3P58005 492 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF117Q03924 483 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CHRNB3Q05901 458 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF141Q15928 474 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 IFI44LQ53G44 452 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 COLEC12Q5KU26 742 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 EID3Q8N140 333 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 SLC15A4Q8N697 577 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 CHID1Q9BWS9 393 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 PINK1Q9BXM7 581 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 AMBRA1Q9C0C7 1298 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 SEMA6AQ9H2E6 1030 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 TRIM45Q9H8W5 580 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 DNAJB12Q9NXW2 375 aaKnown RBP14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 U3KQV3 271 aa14.09□□□□□ -0.15
PDLIM5-202ENST00000318007 TPRP12270 2363 aaKnown RBP14.08□□□□□ -0.15
PDLIM5-202ENST00000318007 ACACBO00763 2458 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 CPSF4LA6NMK7 179 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 AP3D1O14617 1153 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 NEURL1O76050 574 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 HLCSP50747 726 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 RCN1Q15293 331 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 SLC22A10Q63ZE4 541 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 BORAQ6PGQ7 559 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 NUP54Q7Z3B4 507 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 ZDHHC21Q8IVQ6 265 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 ARMC10Q8N2F6 343 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 RASSF5Q8WWW0 418 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 OSBPL11Q9BXB4 747 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 UGT2B28Q9BY64 529 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms