RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TBC1D3BA6NDS4 549 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TBC1D3FA6NER0 549 aaPredicted RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 C1QTNF3-AMACRE9PGA6 284 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 HRO43593 1189 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 FZD7O75084 574 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 UBL3O95164 117 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 SERPINA3P01011 423 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TCRBP04435 133 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 THBS2P35442 1172 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 MC3RP41968 323 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 HSF2Q03933 536 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 TBC1D3GQ6DHY5 549 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 HEPHL1Q6MZM0 1159 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 SAMD14Q8IZD0 417 aaPredicted RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 SLC44A3Q8N4M1 653 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 LINC01555Q8NAE3 123 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 OR2L8Q8NGY9 312 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TMEM255BQ8WV15 326 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 KLK6Q92876 244 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 HGDQ93099 445 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 CD180Q99467 661 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 PPIL3Q9H2H8 161 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 KLHL31Q9H511 634 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TMEM5Q9Y2B1 443 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 AUP1Q9Y679 476 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TRAPPC13A5PLN9 417 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 PRKRAO75569 313 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 ITGA10O75578 1167 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 SLC2A10O95528 541 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 SHC1P29353 583 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 BCL6P41182 706 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 MMP15P51511 669 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 STXBP1P61764 594 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 ACTC1P68032 377 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 ACTA1P68133 377 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 DEFB103AP81534 67 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 CDK3Q00526 305 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 FZD5Q13467 585 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 PUS10Q3MIT2 529 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 ARL9Q6T311 187 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 CEACAM19Q7Z692 300 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 NR2C2APQ86WQ0 139 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 NRROSQ86YC3 692 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 HDDC3Q8N4P3 179 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 ZNF655Q8N720 491 aaPredicted RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 ZNF680Q8NEM1 530 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 OR2A1Q8NGT9 310 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 ABHD4Q8TB40 342 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 SLC2A12Q8TD20 617 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 HS6ST2Q96MM7 605 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TRMT61BQ9BVS5 477 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 HDAC8Q9BY41 377 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 AICDAQ9GZX7 198 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 OR52D1Q9H346 318 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 UCKL1Q9NWZ5 548 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 ABRACLQ9P1F3 81 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 KCNN3Q9UGI6 736 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 SLC7A7Q9UM01 511 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 PCYT1BQ9Y5K3 369 aaPredicted RBP12.9□□□□□ -0.34
MKS1-201ENST00000313863 BRCA2P51587 3418 aa12.9□□□□□ -0.34
MKS1-201ENST00000313863 TRAV6A0A075B6T7 132 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 LRRN3E7EW58 273 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 PRR23D1E9PI22 279 aaPredicted RBP12.89□□□□□ -0.35
MKS1-201ENST00000313863 LANCL1O43813 399 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 PIP5K1CO60331 668 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 THBS1P07996 1170 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 PRR23D2P0DMB1 279 aaPredicted RBP12.89□□□□□ -0.35
MKS1-201ENST00000313863 SAGP10523 405 aaPredicted RBP12.89□□□□□ -0.35
MKS1-201ENST00000313863 IFI30P13284 250 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 BTCP35070 178 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 RGS1Q08116 209 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 LNX2Q8N448 690 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 TMEM99Q8N816 258 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 NACC2Q96BF6 587 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 ART5Q96L15 291 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 C12orf66Q96MD2 445 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 TOX2Q96NM4 488 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 C12orf10Q9HB07 376 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 ZFP64Q9NPA5 681 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 CHST2Q9Y4C5 530 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 TRAV1-2A0A0B4J238 106 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 IGKV1-8A0A0C4DH67 115 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 SLC9B1P1A6NJY1 282 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 FAM183AA6NL82 134 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 PPM1DO15297 605 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 SNAPC5O75971 98 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 PCCBP05166 539 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
MKS1-201ENST00000313863 UBL4AP11441 157 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms